RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PCDHB12Q9Y5F1 795 aa21.75■■□□□ 1.07
SF1-213ENST00000472725 PDCD11Q14690 1871 aaKnown RBP21.75■■□□□ 1.07
SF1-213ENST00000472725 KIAA1671Q9BY89 1806 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 PTGESO14684 152 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 IL18RAPO95256 599 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 RPL13P26373 211 aaKnown RBP21.74■■□□□ 1.07
SF1-213ENST00000472725 SCNN1GP51170 649 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 DSC1Q08554 894 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 ENOX2Q16206 610 aaKnown RBP21.74■■□□□ 1.07
SF1-213ENST00000472725 KLHL40Q2TBA0 621 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 SKOR2Q2VWA4 1001 aaPredicted RBP21.74■■□□□ 1.07
SF1-213ENST00000472725 CCDC183Q5T5S1 534 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 CENPPQ6IPU0 288 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 CRELD2Q6UXH1 353 aaPredicted RBP21.74■■□□□ 1.07
SF1-213ENST00000472725 NT5DC4Q86YG4 428 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 DMAC2Q9NW81 257 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 DERAQ9Y315 318 aa21.74■■□□□ 1.07
SF1-213ENST00000472725 SMIM28A0A1B0GU29 152 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 ZNF233A6NK53 670 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 XPOTO43592 962 aaKnown RBP21.73■■□□□ 1.07
SF1-213ENST00000472725 POMCP01189 267 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 CXCL8P10145 99 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 PPM1AP35813 382 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 TNFSF9P41273 254 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 ALDH7A1P49419 539 aaKnown RBP21.73■■□□□ 1.07
SF1-213ENST00000472725 ACOT2P49753 483 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 FXR1P51114 621 aaKnown RBP eCLIP21.73■■□□□ 1.07
SF1-213ENST00000472725 LRRC63Q05C16 580 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 TUSC3Q13454 348 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 SURF1Q15526 300 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 ZCWPW2Q504Y3 356 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 SPOUT1Q5T280 376 aaKnown RBP21.73■■□□□ 1.07
SF1-213ENST00000472725 BRSK2Q8IWQ3 736 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 SMYD4Q8IYR2 804 aaPredicted RBP21.73■■□□□ 1.07
SF1-213ENST00000472725 MLKLQ8NB16 471 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 LRCH3Q96II8 777 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 ZNF558Q96NG5 402 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 PPP1R10Q96QC0 940 aaKnown RBP21.73■■□□□ 1.07
SF1-213ENST00000472725 TSG101Q99816 390 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 FAM213AQ9BRX8 229 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 NRDE2Q9H7Z3 1164 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 MIOSQ9NXC5 875 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 STK39Q9UEW8 545 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 MAPK8IP1Q9UQF2 711 aa21.73■■□□□ 1.07
SF1-213ENST00000472725 BIN1O00499 593 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 ALDH2P05091 517 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 BMP6P22004 513 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 AFF1P51825 1210 aaKnown RBP21.72■■□□□ 1.07
SF1-213ENST00000472725 EPC2Q52LR7 807 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 SEZ6Q53EL9 994 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 CT47A1Q5JQC4 288 aaPredicted RBP21.72■■□□□ 1.07
SF1-213ENST00000472725 ZBTB41Q5SVQ8 909 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 KCNT2Q6UVM3 1135 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 COLGALT2Q8IYK4 626 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 COLGALT1Q8NBJ5 622 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 UROC1Q96N76 676 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 C11orf84Q9BUA3 381 aaPredicted RBP21.72■■□□□ 1.07
SF1-213ENST00000472725 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 C2CD2Q9Y426 696 aa21.72■■□□□ 1.07
SF1-213ENST00000472725 ANK1P16157 1881 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 BICDL2A1A5D9 508 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 CLIC2O15247 247 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 MAPK13O15264 365 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 EXOC3O60645 756 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 DDHD2O94830 711 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 ARHGEF15O94989 841 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 NR3C1P04150 777 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 CYP3A5P20815 502 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 CCNE1P24864 410 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 CTNNB1P35222 781 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 BCAR1P56945 870 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 SAAL1Q96ER3 474 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 DDX27Q96GQ7 796 aaKnown RBP21.71■■□□□ 1.07
SF1-213ENST00000472725 SEMA6BQ9H3T3 888 aa21.71■■□□□ 1.07
SF1-213ENST00000472725 RBAKQ9NYW8 714 aaPredicted RBP21.71■■□□□ 1.07
SF1-213ENST00000472725 LACTBL1A8MY62 500 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 PPP1R3GB7ZBB8 358 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 ZC3H11AO75152 810 aaKnown RBP eCLIP21.7■■□□□ 1.06
SF1-213ENST00000472725 GALTP07902 379 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 CYP2J2P51589 502 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 ENPEPQ07075 957 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 NAB2Q15742 525 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 ZBTB6Q15916 424 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 SNRNP35Q16560 246 aaKnown RBP21.7■■□□□ 1.06
SF1-213ENST00000472725 ISM2Q6H9L7 571 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 ZNF280BQ86YH2 543 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 FBXO22Q8NEZ5 403 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 C17orf80Q9BSJ5 609 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 TTYH1Q9H313 450 aaPredicted RBP21.7■■□□□ 1.06
SF1-213ENST00000472725 SPG21Q9NZD8 308 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 DACH1Q9UI36 760 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 UBQLN1Q9UMX0 589 aaKnown RBP21.7■■□□□ 1.06
SF1-213ENST00000472725 FRMD4BQ9Y2L6 1034 aa21.7■■□□□ 1.06
SF1-213ENST00000472725 H3BNC9 293 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 MEFVO15553 781 aaPredicted RBP21.69■■□□□ 1.06
SF1-213ENST00000472725 LETM1O95202 739 aaPredicted RBP21.69■■□□□ 1.06
SF1-213ENST00000472725 NR2F2P24468 414 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 RPL9P32969 192 aaKnown RBP21.69■■□□□ 1.06
SF1-213ENST00000472725 NLRP12P59046 1061 aa21.69■■□□□ 1.06
SF1-213ENST00000472725 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms