RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KIF28PB7ZC32 967 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 NKRFO15226 690 aaKnown RBP eCLIP4.11□□□□□ -1.75
XRN1-209ENST00000472625 KPNA6O60684 536 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 EFCAB14O75071 495 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 BAIAP3O94812 1187 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 APPP05067 770 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 SYPP08247 313 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 PCP11498 1178 aaKnown RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 SDHBP21912 280 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 RPL10P27635 214 aaKnown RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 CHMP4BP1P59074 171 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 TNFAIP2Q03169 654 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 KCNA10Q16322 511 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 FSCN1Q16658 493 aaKnown RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 CCDC144BQ3MJ40 725 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 FBXW10Q5XX13 1052 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 IQSEC1Q6DN90 963 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 CTR9Q6PD62 1173 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 NLRX1Q86UT6 975 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 FAM126BQ8IXS8 530 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 KBTBD3Q8NAB2 608 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 REPS2Q8NFH8 660 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 ZSCAN18Q8TBC5 510 aaPredicted RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 BRF1Q92994 677 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 MKL1Q969V6 931 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 DYNLL2Q96FJ2 89 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 INTS4Q96HW7 963 aaKnown RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 FCRL3Q96P31 734 aaPredicted RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 ASB2Q96Q27 587 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 UHRF1Q96T88 793 aaPredicted RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 SGPP1Q9BX95 441 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 NAPBQ9H115 298 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 BOLA2Q9H3K6 86 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 CCSER2Q9H7U1 834 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 RNF146Q9NTX7 359 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 ZBTB40Q9NUA8 1239 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 APEX2Q9UBZ4 518 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 COG5Q9UP83 839 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 SMG5Q9UPR3 1016 aaKnown RBP4.11□□□□□ -1.75
XRN1-209ENST00000472625 FHOD1Q9Y613 1164 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 SLC4A7Q9Y6M7 1214 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 TTC41PQ6P2S7 1318 aa4.11□□□□□ -1.75
XRN1-209ENST00000472625 CDK5RAP2Q96SN8 1893 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 MYOCOSA0A1B0GUC4 107 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 FITM1A5D6W6 292 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 TSPY2A6NKD2 308 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 ARNTLO00327 626 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 MEIS1O00470 390 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 RNF113AO15541 343 aaKnown RBP4.1□□□□□ -1.75
XRN1-209ENST00000472625 GPAA1O43292 621 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 NRDCO43847 1150 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 SNAI1O95863 264 aaPredicted RBP4.1□□□□□ -1.75
XRN1-209ENST00000472625 CD4P01730 458 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 FGBP02675 491 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 EPHX1P07099 455 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CYP2D6P10635 497 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 KCNJ6P48051 423 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CDK7P50613 346 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 BFSP2Q13515 415 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 ITGA7Q13683 1181 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 PPP2R5BQ15173 497 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 PRAMEF19Q5SWL8 479 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 SLFN13Q68D06 897 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CCSAPQ6IQ19 270 aaPredicted RBP4.1□□□□□ -1.75
XRN1-209ENST00000472625 SLCO6A1Q86UG4 719 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CCDC144CPQ8IYA2 1237 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CPXCR1Q8N123 301 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 OXR1Q8N573 874 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 FAM133AQ8N9E0 248 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 SLC43A3Q8NBI5 491 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 PHOSPHO2Q8TCD6 241 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 SCFD2Q8WU76 684 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 DCAF4Q8WV16 495 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 STAG1Q8WVM7 1258 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 KCNN1Q92952 543 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CEP95Q96GE4 821 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 DHRS1Q96LJ7 313 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 STRBPQ96SI9 672 aaKnown RBP4.1□□□□□ -1.75
XRN1-209ENST00000472625 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.1□□□□□ -1.75
XRN1-209ENST00000472625 KATNAL1Q9BW62 490 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 LGR4Q9BXB1 951 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 IRF2BPLQ9H1B7 796 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 HOMER2Q9NSB8 354 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 AP5S1Q9NUS5 200 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 FBXO28Q9NVF7 368 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 MTMR4Q9NYA4 1195 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 CLIP2Q9UDT6 1046 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 STX8Q9UNK0 236 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 MRVI1Q9Y6F6 885 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 RLFQ13129 1914 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 TNKSO95271 1327 aa4.1□□□□□ -1.75
XRN1-209ENST00000472625 ADAMTS20P59510 1910 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 DOCK3Q8IZD9 2030 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 IGKV6D-41A0A0C4DH26 115 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 GSG1L2A8MUP6 293 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 B2RBV5 119 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 TMEM232C9JQI7 657 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 SMAD7O15105 426 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 PRKAB2O43741 272 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms