RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 RGS18Q9NS28 235 aa21.08■□□□□ 0.97
CHMP2B-204ENST00000472024 FAM105AQ9NUU6 356 aa21.08■□□□□ 0.97
CHMP2B-204ENST00000472024 DERAQ9Y315 318 aa21.08■□□□□ 0.97
CHMP2B-204ENST00000472024 IPPQ9Y573 584 aa21.08■□□□□ 0.97
CHMP2B-204ENST00000472024 A0A0U1RQF3 1178 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 SKIP12755 728 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 ZSCAN20P17040 1043 aaPredicted RBP21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 FAM189BP81408 668 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 CBWD6Q4V339 395 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 SEZ6Q53EL9 994 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 CBWD3Q5JTY5 395 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 CBWD5Q5RIA9 395 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 TCERG1LQ5VWI1 586 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 SPECC1LQ69YQ0 1117 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 TWF2Q6IBS0 349 aaKnown RBP21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 IQCDQ96DY2 449 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 SNX27Q96L92 541 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 TSPYL2Q9H2G4 693 aaPredicted RBP21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 NXF3Q9H4D5 531 aaKnown RBP21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 TMEM39AQ9NV64 488 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 C2CD2Q9Y426 696 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 PCDHB2Q9Y5E7 798 aa21.07■□□□□ 0.96
CHMP2B-204ENST00000472024 C4BPAP04003 597 aaKnown RBP21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 CXCL8P10145 99 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 KCNMA1Q12791 1236 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 TBX2Q13207 712 aaPredicted RBP21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 ZACNQ401N2 412 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 KRT39Q6A163 491 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 ZNF598Q86UK7 904 aaKnown RBP21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 LINC01599Q8WXQ3 324 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 ZNF516Q92618 1163 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 CCDC127Q96BQ5 260 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 VWCEQ96DN2 955 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 FNBP1Q96RU3 617 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 TRIM6Q9C030 488 aaPredicted RBP21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 TTYH3Q9C0H2 523 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 PLCB1Q9NQ66 1216 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 SNTG2Q9NY99 539 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 CNTN3Q9P232 1028 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 IMPACTQ9P2X3 320 aa21.06■□□□□ 0.96
CHMP2B-204ENST00000472024 PTPRJQ12913 1337 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 C9IYK1 514 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 INPPL1O15357 1258 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 TIMP1P01033 207 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 KCNE1P15382 129 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 MXI1P50539 228 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 SYCP1Q15431 976 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 EPC2Q52LR7 807 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 SV2AQ7L0J3 742 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 HACE1Q8IYU2 909 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 LMO3Q8TAP4 145 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 SEPT8Q92599 483 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 TOPORSQ9NS56 1045 aaPredicted RBP21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 C1orf112Q9NSG2 853 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 DAAM1Q9Y4D1 1078 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 CITO14578 2027 aa21.05■□□□□ 0.96
CHMP2B-204ENST00000472024 ALPK3Q96L96 1907 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 TRIM43BA6NCK2 446 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 LACTBL1A8MY62 500 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 RECQL4O94761 1208 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 DLATP10515 647 aaKnown RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 ATF7P17544 494 aaPredicted RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 CYP2C18P33260 490 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 GCLMP48507 274 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 MYL7Q01449 175 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 ZBTB6Q15916 424 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 EXOC3L4Q17RC7 722 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 SMYD5Q6GMV2 418 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 GBP6Q6ZN66 633 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 RTN4RL1Q86UN2 441 aaPredicted RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 EFCAB13Q8IY85 973 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 TRIM43Q96BQ3 446 aaPredicted RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 POP1Q99575 1024 aaKnown RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 ADAM2Q99965 735 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 EDEM3Q9BZQ6 932 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 FBXL5Q9UKA1 691 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 GIT1Q9Y2X7 761 aa21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.04■□□□□ 0.96
CHMP2B-204ENST00000472024 YARSP54577 528 aaKnown RBP21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 OSTNP61366 133 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 CETN1Q12798 172 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 TRIM14Q14142 442 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 DUOXA2Q1HG44 320 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 SLC24A5Q71RS6 500 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 DBF4BQ8NFT6 615 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 NUP58Q9BVL2 599 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 RNF39Q9H2S5 420 aa21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 ELAC1Q9H777 363 aaKnown RBP21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.03■□□□□ 0.96
CHMP2B-204ENST00000472024 A0A1W2PQJ5 194 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 PES1O00541 588 aaKnown RBP21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 EOMESO95936 686 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 TNNI1P19237 187 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 PON1P27169 355 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 ARID5BQ14865 1188 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 TDRD10Q5VZ19 366 aaKnown RBP21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 EHBP1Q8NDI1 1231 aa21.02■□□□□ 0.96
CHMP2B-204ENST00000472024 FBXL13Q8NEE6 735 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms