RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
MDM2-216ENST00000471946 KLHL42Q9P2K6 505 aa5.09□□□□□ -1.59
MDM2-216ENST00000471946 SLC23A1Q9UHI7 598 aa5.09□□□□□ -1.59
MDM2-216ENST00000471946 PNMA8BQ9ULN7 279 aaPredicted RBP5.09□□□□□ -1.59
MDM2-216ENST00000471946 PRR5-ARHGAP8B1AHC4 643 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 B5MCH6 92 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 PRPF3O43395 683 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 IPO13O94829 963 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 CYP2C19P33261 490 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 ALDH1A3P47895 512 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 CLRN1P58418 232 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 ZNF280AP59817 542 aaPredicted RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 CDC42EP1Q00587 391 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 MTM1Q13496 603 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 PPP2R5AQ15172 486 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 KHDC1Q4VXA5 237 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 PPP4R3AQ6IN85 833 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 EFCAB12Q6NXP0 572 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 DRC7Q8IY82 874 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 OR52N2Q8NGI0 321 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 TSR2Q969E8 191 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 TMX3Q96JJ7 454 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 LRGUKQ96M69 825 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 CDK5RAP1Q96SZ6 601 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 NUP88Q99567 741 aaPredicted RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 VRK1Q99986 396 aaPredicted RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 GPR87Q9BY21 358 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 METTL14Q9HCE5 456 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 MOCS1Q9NZB8 636 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 POGKQ9P215 609 aa5.08□□□□□ -1.6
MDM2-216ENST00000471946 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 RUVBL1Q9Y265 456 aaKnown RBP5.08□□□□□ -1.6
MDM2-216ENST00000471946 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
MDM2-216ENST00000471946 CYP27B1O15528 508 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 PJA2O43164 708 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 AP1G1O43747 822 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 GPR32O75388 356 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 MAN2A2P49641 1150 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 RAP2BP61225 183 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 CNGB1Q14028 1251 aaPredicted RBP5.07□□□□□ -1.6
MDM2-216ENST00000471946 VPS72Q15906 364 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 USP39Q53GS9 565 aaKnown RBP5.07□□□□□ -1.6
MDM2-216ENST00000471946 METTL24Q5JXM2 366 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 SPDYAQ5MJ70 313 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 OTUD7BQ6GQQ9 843 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 TTC7BQ86TV6 843 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 C1orf210Q8IVY1 113 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 CASKIN2Q8WXE0 1202 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 TFAP2CQ92754 450 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 MRGPRX4Q96LA9 322 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 TSC22D4Q9Y3Q8 395 aa5.07□□□□□ -1.6
MDM2-216ENST00000471946 TCRBV7S2A1N4TA0A589 114 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 LRRC14BA6NHZ5 514 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 DRGXA6NNA5 263 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 SGTAO43765 313 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 SCGB1D2O95969 90 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 RPLP2P05387 115 aaKnown RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 SNRPA1P09661 255 aaKnown RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 ATP5JP18859 108 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 CTXN1P60606 82 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 CRHR2Q13324 411 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 SNAPC2Q13487 334 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 ZNF267Q14586 743 aaPredicted RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 UBXN2BQ14CS0 331 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 PGS1Q32NB8 556 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 ATXN7L2Q5T6C5 722 aaPredicted RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 IFIT1BQ5T764 474 aaKnown RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 DRICH1Q6PGQ1 229 aaPredicted RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 UBE3BQ7Z3V4 1068 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 GRAMD1CQ8IYS0 662 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 DCBLD1Q8N8Z6 715 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 RNF169Q8NCN4 708 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 SLC35G2Q8TBE7 412 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 NSUN6Q8TEA1 469 aaKnown RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 MVB12AQ96EY5 273 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 PHACTR3Q96KR7 559 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 GPR20Q99678 358 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 GSTO2Q9H4Y5 243 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 CLCA2Q9UQC9 943 aa5.06□□□□□ -1.6
MDM2-216ENST00000471946 CFAP20Q9Y6A4 193 aaKnown RBP5.06□□□□□ -1.6
MDM2-216ENST00000471946 GOLGA6L6A8MZA4 724 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 LEFTY2O00292 366 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 TSPAN6O43657 245 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 OFD1O75665 1012 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 POMCP01189 267 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 SBK3P0C264 359 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 LPOP22079 712 aaPredicted RBP5.05□□□□□ -1.6
MDM2-216ENST00000471946 ACRV1P26436 265 aa5.05□□□□□ -1.6
MDM2-216ENST00000471946 NRN1LQ496H8 165 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms