RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PLS3P13797 630 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 STMN1P16949 149 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 NBPF9Q3BBW0 867 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 CATSPERBQ9H7T0 1116 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 TRAF3IP3Q9Y228 551 aa9.08□□□□□ -0.96
CD47-204ENST00000471694 H2AFYO75367 372 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 NCF2P19878 526 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 RFC1P35251 1148 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 EPHA7Q15375 998 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 RAD54LQ92698 747 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 F5H5T6 163 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 TLR2O60603 784 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PCK1P35558 622 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 NDUFA8P51970 172 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 ITPK1Q13572 414 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ATG16L1Q676U5 607 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 VTNP04004 478 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 NR3C1P04150 777 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 KRT20P35900 424 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 RFX3P48380 749 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ZC3H12BQ5HYM0 836 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 PTRHD1Q6GMV3 140 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 ZNF280DQ6N043 979 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PATL1Q86TB9 770 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 BTN2A2Q8WVV5 523 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 HOMER3Q9NSC5 361 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 CALCOCO1Q9P1Z2 691 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 DNAJC12Q9UKB3 198 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PKP3Q9Y446 797 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 TAF6P49848 677 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 RASSF2P50749 326 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PDAP1Q13442 181 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 CEP55Q53EZ4 464 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ALKBH2Q6NS38 261 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 C10orf53Q8N6V4 93 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.07□□□□□ -0.96
CD47-204ENST00000471694 PYROXD1Q8WU10 500 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 C11orf70Q9BRQ4 267 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 COPS7BQ9H9Q2 264 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 APPL1Q9UKG1 709 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PRR12Q9ULL5 1215 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 KRT87PA6NCN2 255 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 EFCAB8A8MWE9 144 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 C5orf58C9J3I9 102 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 APOL1O14791 398 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ZFXP17010 805 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 GUCA1AP43080 201 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 ACOT2P49753 483 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 NCALDP61601 193 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PFKFB3Q16875 520 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 SPZ1Q9BXG8 430 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 MRPL9Q9BYD2 267 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 KIAA1468Q9P260 1216 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 USH1CQ9Y6N9 552 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ATP9BO43861 1147 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PPP6R2O75170 966 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 NDUFS3O75489 264 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 CYP2C8P10632 490 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 CTCFP49711 727 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 MMP14P50281 582 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 HPCAP84074 193 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 PRKAA1Q13131 559 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 GLRA4Q5JXX5 417 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 GRAMD1CQ8IYS0 662 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 ZSCAN18Q8TBC5 510 aaPredicted RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.07□□□□□ -0.96
CD47-204ENST00000471694 DDX56Q9NY93 547 aaKnown RBP9.07□□□□□ -0.96
CD47-204ENST00000471694 NFU1Q9UMS0 254 aa9.07□□□□□ -0.96
CD47-204ENST00000471694 DGAT1O75907 488 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 HSPA4LO95757 839 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 TNNI3P19429 210 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 BACE1P56817 501 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 AMHR2Q16671 573 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 CCDC38Q502W7 563 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 ZRANB3Q5FWF4 1079 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 SPDYAQ5MJ70 313 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
CD47-204ENST00000471694 MOV10L1Q9BXT6 1211 aaKnown RBP9.06□□□□□ -0.96
CD47-204ENST00000471694 CERS4Q9HA82 394 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 MRPL17Q9NRX2 175 aaKnown RBP9.06□□□□□ -0.96
CD47-204ENST00000471694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.06□□□□□ -0.967e-7■□□□□ 8.3
CD47-204ENST00000471694 ARHGAP26Q9UNA1 814 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 STK38LQ9Y2H1 464 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 FAM200BP0CF97 657 aa9.06□□□□□ -0.96
CD47-204ENST00000471694 CSE1LP55060 971 aaKnown RBP9.06□□□□□ -0.96
CD47-204ENST00000471694 KIF23Q02241 960 aaPredicted RBP9.06□□□□□ -0.96
CD47-204ENST00000471694 RABGAP1LQ5R372 815 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms