RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SPATA31D3P0C874 917 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 OSMP13725 252 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 ALOX15P16050 662 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 CPEP16870 476 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 LAG3P18627 525 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MGAT1P26572 445 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 PTPN7P35236 360 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 RAP2BP61225 183 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 ERVK-21P61565 698 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 PPP3CAQ08209 521 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MALLQ13021 153 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MAPK7Q13164 816 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 PTPAQ15257 358 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 BMT2Q1RMZ1 405 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 BEAN1Q3B7T3 259 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 PDCD4Q53EL6 469 aaKnown RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MUM1L1Q5H9M0 696 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 GJC2Q5T442 439 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MBNL2Q5VZF2 373 aaKnown RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 LAIR1Q6GTX8 287 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 EFCAB12Q6NXP0 572 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 SPATA31D4Q6ZUB0 917 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 Q6ZVL8 140 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 VRK3Q8IV63 474 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 BEND2Q8NDZ0 799 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 GPR156Q8NFN8 814 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 OR7D4Q8NG98 312 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 SPATA3Q8NHX4 192 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 ZFP28Q8NHY6 868 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 SLC35B2Q8TB61 432 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 WDR66Q8TBY9 1149 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 HOXB13Q92826 284 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 MYEOVQ96EZ4 313 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 AHCYL2Q96HN2 611 aaKnown RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 BBC3Q96PG8 261 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 DCLRE1CQ96SD1 692 aaKnown RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 UHRF1Q96T88 793 aaPredicted RBP2.01□□□□□ -2.09
UBXN4-207ENST00000471246 TEX101Q9BY14 249 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 GREM2Q9H772 168 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 BCO1Q9HAY6 547 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 AKIP1Q9NQ31 210 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 LANCL2Q9NS86 450 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 DNAJC28Q9NX36 388 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 POGKQ9P215 609 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 PRKAB1Q9Y478 270 aa2.01□□□□□ -2.09
UBXN4-207ENST00000471246 ATRNL1Q5VV63 1379 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 WASHC2AQ641Q2 1341 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 GAGE12BA1L429 117 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 GAGE12HA6NDE8 117 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 UNC119BA6NIH7 251 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 TMEM200CA6NKL6 621 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 MARCH11A6NNE9 402 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 DIRC3C9JPN6 131 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ENDOD1O94919 500 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 CLSTN1O94985 981 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 NDUFA10O95299 355 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SNRPA1P09661 255 aaKnown RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 RAP2AP10114 183 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 RBP3P10745 1247 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 PROZP22891 400 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 DDX6P26196 483 aaKnown RBP eCLIP2□□□□□ -2.09
UBXN4-207ENST00000471246 GUCY1A2P33402 732 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SREBF1P36956 1147 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 MCAMP43121 646 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 GPR3P46089 330 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ALDH1A3P47895 512 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 MTNR1BP49286 362 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 CHN2P52757 468 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SLC5A3P53794 718 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 PER3P56645 1201 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 CLRN1P58418 232 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 MGAT2Q10469 447 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 FAPQ12884 760 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SP140Q13342 867 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SEPT2Q15019 361 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ANO4Q32M45 955 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 FAM47AQ5JRC9 791 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ATXN7L2Q5T6C5 722 aaPredicted RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 FAM102AQ5T9C2 384 aaPredicted RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 HECTD2Q5U5R9 776 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 RNF219Q5W0B1 726 aaPredicted RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 AFMIDQ63HM1 303 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 EGFLAMQ63HQ2 1017 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 METRNLQ641Q3 311 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 Q6YL49 198 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 DRC7Q8IY82 874 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 PQLC1Q8N2U9 271 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 CPEB3Q8NE35 698 aaKnown RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 ATL2Q8NHH9 583 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 FATE1Q969F0 183 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 PHACTR3Q96KR7 559 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ADAM2Q99965 735 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ADI1Q9BV57 179 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 SENP6Q9GZR1 1112 aaPredicted RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 LDAHQ9H6V9 325 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 RBM12Q9NTZ6 932 aaKnown RBP2□□□□□ -2.09
UBXN4-207ENST00000471246 ANKFY1Q9P2R3 1169 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 ZBTB21Q9ULJ3 1066 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 USP15Q9Y4E8 981 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms