RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 THAP12O43422 761 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 XPOTO43592 962 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 TLR2O60603 784 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 H2AFZP0C0S5 128 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CDK4P11802 303 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 TATP17735 454 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 AMPD1P23109 780 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 RPL21P46778 160 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 AP2B1P63010 937 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 GPSM2P81274 684 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 KIF22Q14807 665 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 C16orf72Q14CZ0 275 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 IL17AQ16552 155 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 MMEL1Q495T6 779 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 DUPD1Q68J44 220 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 H2AFVQ71UI9 128 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 VPS36Q86VN1 386 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SYCE1Q8N0S2 351 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ARHGAP24Q8N264 748 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SLC25A41Q8N5S1 370 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 FAM160A2Q8N612 972 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 TPCN2Q8NHX9 752 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 PIP4K2CQ8TBX8 421 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 DQX1Q8TE96 717 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 GIPC3Q8TF64 312 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 RSPH1Q8WYR4 309 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ATP6V0A1Q93050 837 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 BTBD10Q9BSF8 475 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 METTL22Q9BUU2 404 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 GRIP2Q9C0E4 1043 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ERVK-5Q9HDB9 667 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ZDHHC18Q9NUE0 388 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 TUBA8Q9NY65 449 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 SELENONQ9NZV5 590 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CEP72Q9P209 647 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CNOT7Q9UIV1 285 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 STX8Q9UNK0 236 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 LZTS1Q9Y250 596 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 RBMX2Q9Y388 322 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 FAM187AA6NFU0 413 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 MOXD2PA6NHM9 499 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 MINDY4BA8MYZ0 360 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 IPO5O00410 1097 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 CES2O00748 559 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 HOXA2O43364 376 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 KLRC4O43908 158 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 GAS8O95995 478 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CLPTM1O96005 669 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 KRT15P19012 456 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 LONP1P36776 959 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 KCNJ1P48048 391 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 HDAC4P56524 1084 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 PTENP60484 403 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 PTK2Q05397 1052 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 OVGP1Q12889 678 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CDC16Q13042 620 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 MAPK7Q13164 816 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 LRRC41Q15345 812 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 KYNUQ16719 465 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SPDYCQ5MJ68 293 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 C1orf146Q5VVC0 180 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SPRYD7Q5W111 196 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 TBC1D9BQ66K14 1250 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 TMEM214Q6NUQ4 689 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 SLC2A7Q6PXP3 512 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ANO5Q75V66 913 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ANKRD35Q8N283 1001 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 GSDMBQ8TAX9 411 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 RASGRP4Q8TDF6 673 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 MAML3Q96JK9 1138 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CRAMP1Q96RY5 1269 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 TSG101Q99816 390 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CCDC28BQ9BUN5 200 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 EIF2AQ9BY44 585 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 TXLNGYQ9BZA5 131 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 LRRC27Q9C0I9 530 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 UBA5Q9GZZ9 404 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CDC42EP4Q9H3Q1 356 aaKnown RBP4.49□□□□□ -1.69
VPS50-210ENST00000471188 NDUFA13Q9P0J0 144 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ASIC3Q9UHC3 531 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 CROTQ9UKG9 612 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 ITGB1BP2Q9UKP3 347 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 TRIM17Q9Y577 477 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 UTYO14607 1347 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 NWD2Q9ULI1 1742 aa4.49□□□□□ -1.69
VPS50-210ENST00000471188 SOCS7O14512 581 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 NDC80O14777 642 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 ZNF862O60290 1169 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 TOM1O60784 492 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 TRPA1O75762 1119 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 ZWINTO95229 277 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 EYA4O95677 639 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 RARGP13631 454 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 ANPEPP15144 967 aa4.48□□□□□ -1.69
VPS50-210ENST00000471188 PLCG1P19174 1290 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms