RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 NT5DC4Q86YG4 428 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 RNF169Q8NCN4 708 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 SNX27Q96L92 541 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 PPP1R10Q96QC0 940 aaKnown RBP13.74□□□□□ -0.21
SND1-209ENST00000470723 FAM213AQ9BRX8 229 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
SND1-209ENST00000470723 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 CWH43Q9H720 699 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 DERAQ9Y315 318 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 CHD9Q3L8U1 2897 aa13.74□□□□□ -0.21
SND1-209ENST00000470723 TBKBP1A7MCY6 615 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 CETN3O15182 167 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 EXOC3O60645 756 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 IL18RAPO95256 599 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 NR2F2P24468 414 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 GATMP50440 423 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 RABGGTBP53611 331 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 OSTNP61366 133 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 DSC1Q08554 894 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 PAK1Q13153 545 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 SURF1Q15526 300 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 RAB30Q15771 203 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 SNRNP35Q16560 246 aaKnown RBP13.73□□□□□ -0.21
SND1-209ENST00000470723 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 SAAL1Q96ER3 474 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 CEP63Q96MT8 703 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
SND1-209ENST00000470723 YME1L1Q96TA2 773 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 TSG101Q99816 390 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 APOL6Q9BWW8 343 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 KLK14Q9P0G3 267 aa13.73□□□□□ -0.21
SND1-209ENST00000470723 CARNS1A5YM72 827 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 GOLGA8IPA6NC78 632 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 AKAP3O75969 853 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 THP07101 528 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 CXCL8P10145 99 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 HARSP12081 509 aaKnown RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 CYP3A5P20815 502 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 PSMC2P35998 433 aaKnown RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 MLH1P40692 756 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 CASP4P49662 377 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 CYP2J2P51589 502 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 TYRO3Q06418 890 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 CYP24A1Q07973 514 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 GRIK3Q13003 919 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 PSMD6Q15008 389 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 STX1AQ16623 288 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 ZSCAN23Q3MJ62 389 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 FAM117BQ6P1L5 589 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 ZNF280BQ86YH2 543 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 FIBCD1Q8N539 461 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 URGCPQ8TCY9 931 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 TMEM175Q9BSA9 504 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 GZF1Q9H116 711 aaPredicted RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
SND1-209ENST00000470723 C2CD2Q9Y426 696 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 ANK1P16157 1881 aa13.72□□□□□ -0.21
SND1-209ENST00000470723 LCHNA4D1U4 455 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 LINC01553A4QN01 128 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 IKBKBO14920 756 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 DDHD2O94830 711 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 ALDH2P05091 517 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 CCDC192P0DO97 292 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 MYOGP15173 224 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 PBX2P40425 430 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 SCNN1GP51170 649 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.21
SND1-209ENST00000470723 ERVK-21P61565 698 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 SPATA1Q5VX52 437 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 BPIFA3Q9BQP9 254 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 SLC38A7Q9NVC3 462 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 RBAKQ9NYW8 714 aaPredicted RBP13.71□□□□□ -0.21
SND1-209ENST00000470723 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 FRMD4BQ9Y2L6 1034 aa13.71□□□□□ -0.21
SND1-209ENST00000470723 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.22
SND1-209ENST00000470723 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
SND1-209ENST00000470723 C5orf67F2Z3F1 127 aa13.7□□□□□ -0.22
SND1-209ENST00000470723 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
SND1-209ENST00000470723 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms