RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 UBXN11Q5T124 520 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 KLHDC7AQ5VTJ3 777 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 C15orf39Q6ZRI6 1047 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 SV2AQ7L0J3 742 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 CD302Q8IX05 232 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 CEP120Q8N960 986 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 TC2NQ8N9U0 490 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 NEK11Q8NG66 645 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 LMO3Q8TAP4 145 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 ACAP3Q96P50 834 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 PANX2Q96RD6 677 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 CRACR2AQ9BSW2 395 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 CCDC94Q9BW85 323 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 INTS2Q9H0H0 1204 aaKnown RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 GANQ9H2C0 597 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 ASB7Q9H672 318 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 MMRN2Q9H8L6 949 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 AGO3Q9H9G7 860 aaKnown RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 SIX2Q9NPC8 291 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 TOPORSQ9NS56 1045 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 FAM207AQ9NSI2 230 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 CEP72Q9P209 647 aa9.43□□□□□ -0.9
HDLBP-233ENST00000470710 LUC7L2Q9Y383 392 aaKnown RBP9.43□□□□□ -0.9
HDLBP-233ENST00000470710 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 DCDC2CA8MYV0 355 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 EPHB6O15197 1021 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 PQBP1O60828 265 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 C4BPAP04003 597 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 GHRP10912 638 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TNNI1P19237 187 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 SLC9A1P19634 815 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 RFX1P22670 979 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 FECHP22830 423 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 CD52P31358 61 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 CASP14P31944 242 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 FXR1P51114 621 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 RAB27AP51159 221 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 DUOXA2Q1HG44 320 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 SLC10A6Q3KNW5 377 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TWF2Q6IBS0 349 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM65Q6PJ69 517 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 LRRC8DQ7L1W4 858 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 NT5DC4Q86YG4 428 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TMEM192Q8IY95 271 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 FBXL13Q8NEE6 735 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 DIS3LQ8TF46 1054 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 SNX27Q96L92 541 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM6Q9C030 488 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 MCOLN1Q9GZU1 580 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
HDLBP-233ENST00000470710 C11orf49Q9H6J7 331 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 PADI3Q9ULW8 664 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 MYO6Q9UM54 1294 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 DERAQ9Y315 318 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 C2CD2Q9Y426 696 aa9.42□□□□□ -0.9
HDLBP-233ENST00000470710 PTPRJQ12913 1337 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 LACTBL1A8MY62 500 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ZNF623O75123 536 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ZC3H11AO75152 810 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ACTN1P12814 892 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 UCHL3P15374 230 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 HNRNPH3P31942 346 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 KRT9P35527 623 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 YARSP54577 528 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 POLR2FP61218 127 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 OSTNP61366 133 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 TLE2Q04725 743 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 MBTPS1Q14703 1052 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 TRIM60Q495X7 471 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 XKR4Q5GH76 650 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 TDRD10Q5VZ19 366 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 LMBRD2Q68DH5 695 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 ALKAL1Q6UXT8 129 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 EFCAB13Q8IY85 973 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 HACE1Q8IYU2 909 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 CCDC112Q8NEF3 446 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 OR8K1Q8NGG5 319 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
HDLBP-233ENST00000470710 CACTINQ8WUQ7 758 aaKnown RBP9.41□□□□□ -0.9
HDLBP-233ENST00000470710 CPLX3Q8WVH0 158 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms