RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 GANQ9H2C0 597 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 ASB7Q9H672 318 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 PLEKHA5Q9HAU0 1116 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 PDCD11Q14690 1871 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 CD4P01730 458 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 TNNI1P19237 187 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 HNRNPH3P31942 346 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 GJA8P48165 433 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 DUOXA2Q1HG44 320 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ZACNQ401N2 412 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 SEZ6Q53EL9 994 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 FBXO47Q5MNV8 452 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 C1orf53Q5VUE5 145 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 CDR2LQ86X02 465 aaPredicted RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 NT5DC4Q86YG4 428 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 FAM126BQ8IXS8 530 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ZNF516Q92618 1163 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 SYN2Q92777 582 aaPredicted RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ACAP3Q96P50 834 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 INTS2Q9H0H0 1204 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ABHD10Q9NUJ1 306 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ST3GAL5Q9UNP4 418 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ZKSCAN5Q9Y2L8 839 aa16.38■□□□□ 0.21
COL4A5-203ENST00000470339 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 NPTXRO95502 500 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 MYCP01106 439 aaPredicted RBP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 CKBP12277 381 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 UCHL3P15374 230 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 CCZ1BP86790 482 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 CDK17Q00537 523 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 LRMPQ12912 555 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 SMYD5Q6GMV2 418 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 BAP1Q92560 729 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 FAM81BQ96LP2 452 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 ZNF830Q96NB3 372 aaPredicted RBP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 BAG1Q99933 345 aaPredicted RBP16.37■□□□□ 0.21
COL4A5-203ENST00000470339 ERVK-5Q9HDB9 667 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 RAB20Q9NX57 234 aa16.37■□□□□ 0.21
COL4A5-203ENST00000470339 EPHB6O15197 1021 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TLR3O15455 904 aaKnown RBP16.36■□□□□ 0.21
COL4A5-203ENST00000470339 CTSHP09668 335 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 SKILP12757 684 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 KCNJ6P48051 423 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 WNT7BP56706 349 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 POLR2FP61218 127 aaKnown RBP16.36■□□□□ 0.21
COL4A5-203ENST00000470339 BFSP2Q13515 415 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 SLC10A6Q3KNW5 377 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 UBXN11Q5T124 520 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 ZNF618Q5T7W0 954 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 SLC39A5Q6ZMH5 540 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 ZSCAN30Q86W11 494 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TMTC1Q8IUR5 882 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 CEP120Q8N960 986 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TOX2Q96NM4 488 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
COL4A5-203ENST00000470339 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
COL4A5-203ENST00000470339 ZNHIT6Q9NWK9 470 aaKnown RBP16.36■□□□□ 0.21
COL4A5-203ENST00000470339 APEX2Q9UBZ4 518 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 DERAQ9Y315 318 aa16.36■□□□□ 0.21
COL4A5-203ENST00000470339 LACTBL1A8MY62 500 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 PITPNM1O00562 1244 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 CXCL8P10145 99 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 COL6A1P12109 1028 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 ACTN1P12814 892 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 OSTNP61366 133 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 GOLGA8FQ08AF8 430 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 GOLGA8DPQ0D2H9 430 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 PAK2Q13177 524 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 LPIN1Q14693 890 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 MEA1Q16626 185 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 TDRD10Q5VZ19 366 aaKnown RBP16.35■□□□□ 0.21
COL4A5-203ENST00000470339 PDXDC1Q6P996 788 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 TRAF7Q6Q0C0 670 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 TMEM139Q8IV31 216 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 TMEM192Q8IY95 271 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
COL4A5-203ENST00000470339 STK33Q9BYT3 514 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 AIPL1Q9NZN9 384 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 PADI3Q9ULW8 664 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 C2CD2Q9Y426 696 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 PTPRJQ12913 1337 aa16.35■□□□□ 0.21
COL4A5-203ENST00000470339 ARHGAP6O43182 974 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms