RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 MCM6Q14566 821 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 SPATA31D4Q6ZUB0 917 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 USP49Q70CQ1 688 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 PALB2Q86YC2 1186 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 GLYCTKQ8IVS8 523 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 EDAQ92838 391 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 REEP2Q9BRK0 252 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 SFXN1Q9H9B4 322 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 NR2E1Q9Y466 385 aa17.97■□□□□ 0.47
GTF3C2-209ENST00000470115 SMIM28A0A1B0GU29 152 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 MCF2P10911 925 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 HARSP12081 509 aaKnown RBP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 RPL17P18621 184 aaKnown RBP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 IGFBP6P24592 240 aaPredicted RBP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 SPECC1Q5M775 1068 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 FAM171A1Q5VUB5 890 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 PRSS55Q6UWB4 352 aaPredicted RBP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 MPZL3Q6UWV2 235 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 ALKAL1Q6UXT8 129 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 GPR149Q86SP6 731 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 GPR65Q8IYL9 337 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 RAD54LQ92698 747 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 EPSTI1Q96J88 318 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 MAN1C1Q9NR34 630 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 FNIP2Q9P278 1114 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 LARSQ9P2J5 1176 aaKnown RBP17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 ODF2LQ9ULJ1 636 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
GTF3C2-209ENST00000470115 MYH11P35749 1972 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 C2CD4DB7Z1M9 353 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 BRD1O95696 1058 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 GLUD1P00367 558 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 NCKAP1LP55160 1127 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 RTP2Q5QGT7 225 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 HAUS6Q7Z4H7 955 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 CEP57Q86XR8 500 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 ACAP3Q96P50 834 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 TTPALQ9BTX7 342 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 CCSER1Q9C0I3 900 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 GOLGA2P5Q9HBQ8 144 aa17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 TOPORSQ9NS56 1045 aaPredicted RBP17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
GTF3C2-209ENST00000470115 TRIP11Q15643 1979 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 STX6O43752 255 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 TOM1L1O75674 476 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 FAM13AO94988 1023 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 KRT18P05783 430 aaKnown RBP17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 DDIT3P35638 169 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 CLCNKBP51801 687 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 ZXDAP98168 799 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 SOX4Q06945 474 aaPredicted RBP17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 SEZ6Q53EL9 994 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 XKR4Q5GH76 650 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 DCLRE1AQ6PJP8 1040 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 MYCT1Q8N699 235 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 LARP4BQ92615 738 aaKnown RBP17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 SNX27Q96L92 541 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 ZMAT2Q96NC0 199 aaKnown RBP17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 ANKFY1Q9P2R3 1169 aa17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
GTF3C2-209ENST00000470115 PLXNA3P51805 1871 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 CCDC195A0A1B0GUA6 201 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 H0YCG3 227 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 MEFVO15553 781 aaPredicted RBP17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 TGM5O43548 720 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 RFPL2O75678 378 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 B3GAT3O94766 335 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 CREMQ03060 361 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 ELAVL2Q12926 359 aaKnown RBP17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 NOLC1Q14978 699 aaKnown RBP eCLIP17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 LILRA6Q6PI73 481 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 CD300LGQ6UXG3 332 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 ZPBP2Q6X784 338 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 TRIM67Q6ZTA4 783 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 HFE2Q6ZVN8 426 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 LNX1Q8TBB1 728 aaPredicted RBP17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 PIK3R5Q8WYR1 880 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 SNX21Q969T3 373 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 UROC1Q96N76 676 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
GTF3C2-209ENST00000470115 TMEM189-UBE2V1I3L0A0 370 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 CLDN3O15551 220 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 KCNE1P15382 129 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 MATR3P43243 847 aaKnown RBP eCLIP17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 ZNF131P52739 623 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 MCL1Q07820 350 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 PSMD5Q16401 504 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 PTPN21Q16825 1174 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 UPP1Q16831 310 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 ELMSAN1Q6PJG2 1045 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 C15orf39Q6ZRI6 1047 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 HDAC7Q8WUI4 952 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 BICD1Q96G01 975 aa17.92■□□□□ 0.46
GTF3C2-209ENST00000470115 USP28Q96RU2 1077 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms