RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 H0Y858 1186 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 PSMD5Q16401 504 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 NT5DC1Q5TFE4 455 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 CEP57Q86XR8 500 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 LNX1Q8TBB1 728 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-208ENST00000470076 MYADMQ96S97 322 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 CLSTN3Q9BQT9 956 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 CXCL16Q9H2A7 254 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 FBXW11Q9UKB1 542 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 FBXL21Q9UKT6 434 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 TNFSF13BQ9Y275 285 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 KIF3AQ9Y496 699 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 PCDHB6Q9Y5E3 794 aa19.24■□□□□ 0.67
COL7A1-208ENST00000470076 VWA8A3KMH1 1905 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 TMEM189-UBE2V1I3L0A0 370 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 PRPHP41219 470 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 LIN9Q5TKA1 542 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 KRT79Q5XKE5 535 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 FLCNQ8NFG4 579 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 PHLPP2Q6ZVD8 1323 aa19.23■□□□□ 0.67
COL7A1-208ENST00000470076 HNRNPA1P09651 372 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL7A1-208ENST00000470076 LAMP2P13473 410 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 AOC1P19801 751 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 NPTX2P47972 431 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 PEX3P56589 373 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 CWF19L1Q69YN2 538 aaKnown RBP19.22■□□□□ 0.67
COL7A1-208ENST00000470076 DCLRE1AQ6PJP8 1040 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-208ENST00000470076 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 RSAD2Q8WXG1 361 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 UROC1Q96N76 676 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 PPP1R10Q96QC0 940 aaKnown RBP19.22■□□□□ 0.67
COL7A1-208ENST00000470076 WNT16Q9UBV4 365 aa19.22■□□□□ 0.67
COL7A1-208ENST00000470076 ZFP37Q9Y6Q3 630 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-208ENST00000470076 CCDC169A6NNP5 214 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 E9PMD0 336 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 NARSO43776 548 aaKnown RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 B3GAT3O94766 335 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 NPR3P17342 541 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 HOXA9P31269 272 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 DMP1Q13316 513 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 C8orf34Q49A92 452 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 GLRA4Q5JXX5 417 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 GET4Q7L5D6 327 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 SIX5Q8N196 739 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 SLC44A3Q8N4M1 653 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 DOCK6Q96HP0 2047 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 DRC1Q96MC2 740 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 RTP3Q9BQQ7 232 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 CCDC94Q9BW85 323 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 MRPL4Q9BYD3 311 aaKnown RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 C17orf75Q9HAS0 396 aa19.21■□□□□ 0.67
COL7A1-208ENST00000470076 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 TOPORSQ9NS56 1045 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
COL7A1-208ENST00000470076 PP2D1A8MPX8 630 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 PROB1E7EW31 1015 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 TRAPPC3O43617 180 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 ST18O60284 1047 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 GFRA3O60609 400 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 HIP1RO75146 1068 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 C8AP07357 584 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 SRFP11831 508 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 FGFR3P22607 806 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 GRM5P41594 1212 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
COL7A1-208ENST00000470076 RABEP1Q15276 862 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 PPM1LQ5SGD2 360 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 DAW1Q8N136 415 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 CDT1Q9H211 546 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 KMT5AQ9NQR1 393 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 ARHGAP28Q9P2N2 729 aa19.2■□□□□ 0.66
COL7A1-208ENST00000470076 MYO15AQ9UKN7 3530 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 SMIM28A0A1B0GU29 152 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 CFHP08603 1231 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 FSHRP23945 695 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 CLCNKBP51801 687 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 RAB33AQ14088 237 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 IL17AQ16552 155 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 UPP1Q16831 310 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 ZNF568Q3ZCX4 644 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 XKR4Q5GH76 650 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 RINT1Q6NUQ1 792 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 GRASPQ7Z6J2 395 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-208ENST00000470076 KCTD17Q8N5Z5 321 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 RUSC1Q9BVN2 902 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 TIPINQ9BVW5 301 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 PTPRHQ9HD43 1115 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 SLC38A7Q9NVC3 462 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 MTRRQ9UBK8 725 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
COL7A1-208ENST00000470076 VPS13AQ96RL7 3174 aa19.19■□□□□ 0.66
COL7A1-208ENST00000470076 CITO14578 2027 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
COL7A1-208ENST00000470076 CFAP54Q96N23 3096 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 ANHXE9PGG2 379 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms