RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 OTUD7AQ8TE49 926 aaPredicted RBP12.64□□□□□ -0.39
COMMD2-202ENST00000469896 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
COMMD2-202ENST00000469896 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
COMMD2-202ENST00000469896 HCFC1R1Q9NWW0 138 aa12.64□□□□□ -0.39
COMMD2-202ENST00000469896 SPAG17Q6Q759 2223 aa12.64□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF462Q96JM2 2506 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF263O14978 683 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF76P36508 570 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 UAP1L1Q3KQV9 507 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 RTL10Q7L3V2 364 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF410Q86VK4 478 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 CNNM3Q8NE01 707 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 CSGALNACT1Q8TDX6 532 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 DEPDC1BQ8WUY9 529 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 HNRNPLLQ8WVV9 542 aaKnown RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
COMMD2-202ENST00000469896 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 PCDHA10Q9Y5I2 948 aa12.63□□□□□ -0.39
COMMD2-202ENST00000469896 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 A0A087WZ62 844 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 MEIS1O00470 390 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 RHOP08100 348 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 DSC1Q08554 894 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 SCAPQ12770 1279 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 TRDNQ13061 729 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 PLK5Q496M5 336 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 NYAP1Q6ZVC0 841 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF605Q86T29 641 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 FDXACB1Q9BRP7 624 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 GPR62Q9BZJ7 368 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
COMMD2-202ENST00000469896 AGPAT5Q9NUQ2 364 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 DACH1Q9UI36 760 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 ADAM28Q9UKQ2 775 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
COMMD2-202ENST00000469896 BCLAF3A2AJT9 711 aaKnown RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 SMAPO00193 183 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 TADA2AO75478 443 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 OATP04181 439 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 CAPNS1P04632 268 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 ITGA4P13612 1032 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 FCARP24071 287 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 KARSQ15046 597 aaKnown RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 FAM78AQ5JUQ0 283 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 PRSS55Q6UWB4 352 aaPredicted RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 UBL7Q96S82 380 aaPredicted RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 AVENQ9NQS1 362 aaPredicted RBP12.61□□□□□ -0.39
COMMD2-202ENST00000469896 TBC1D22BQ9NU19 505 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 SLC8A2Q9UPR5 921 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 APC2O95996 2303 aa12.61□□□□□ -0.39
COMMD2-202ENST00000469896 CELSR3Q9NYQ7 3312 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 F8W810 466 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF197O14709 1029 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF862O60290 1169 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 ATG13O75143 517 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
COMMD2-202ENST00000469896 CEBPBP17676 345 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 PSMD5Q16401 504 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 SLC5A9Q2M3M2 681 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 RTP2Q5QGT7 225 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 TEX2Q8IWB9 1127 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 YAF2Q8IY57 180 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 CLSTN3Q9BQT9 956 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 TTPALQ9BTX7 342 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 NPDC1Q9NQX5 325 aaPredicted RBP12.6□□□□□ -0.39
COMMD2-202ENST00000469896 C2orf42Q9NWW7 574 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 DOCK6Q96HP0 2047 aa12.6□□□□□ -0.39
COMMD2-202ENST00000469896 USP9XQ93008 2570 aaPredicted RBP12.59□□□□□ -0.39
COMMD2-202ENST00000469896 CACNA1EQ15878 2313 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 SPAARA0A1B0GVQ0 90 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
COMMD2-202ENST00000469896 PTPN2P17706 415 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 MLH1P40692 756 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 GNAQP50148 359 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 LMAN2Q12907 356 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 ZNF423Q2M1K9 1284 aa12.59□□□□□ -0.39
COMMD2-202ENST00000469896 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms