RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
FAM228B-203ENST00000469867 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 NRP1O14786 923 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 ITGA4P13612 1032 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 SYKP43405 635 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 TFDP1Q14186 410 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 ZBTB33Q86T24 672 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
FAM228B-203ENST00000469867 CBX8Q9HC52 389 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 MED24O75448 989 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 MYBP10242 640 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 AKAP5P24588 427 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 ARL2P36404 184 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 SCNN1GP51170 649 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 PNOCQ13519 176 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 ELF2Q15723 593 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 AMHR2Q16671 573 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 FBXO38Q6PIJ6 1188 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 POLD4Q9HCU8 107 aa12.78□□□□□ -0.36
FAM228B-203ENST00000469867 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
FAM228B-203ENST00000469867 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.36
FAM228B-203ENST00000469867 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 CUTAO60888 179 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.37
FAM228B-203ENST00000469867 OR1G1P47890 313 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 ZXDAP98168 799 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 ITIH3Q06033 890 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 KCNH3Q9ULD8 1083 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 MORC2Q9Y6X9 1032 aaPredicted RBP12.77□□□□□ -0.37
FAM228B-203ENST00000469867 TMEM221A6NGB7 291 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 M0R296 226 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 POLR2DO15514 142 aaKnown RBP12.77□□□□□ -0.37
FAM228B-203ENST00000469867 CASP1P29466 404 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 TAS1R1Q7RTX1 841 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 CABP7Q86V35 215 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 MFSD14AQ96MC6 490 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 KLK14Q9P0G3 267 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
FAM228B-203ENST00000469867 SRPRBQ9Y5M8 271 aaKnown RBP12.77□□□□□ -0.37
FAM228B-203ENST00000469867 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 KLRC2P26717 231 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 AXLP30530 894 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
FAM228B-203ENST00000469867 GIT2Q14161 759 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
FAM228B-203ENST00000469867 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
FAM228B-203ENST00000469867 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
FAM228B-203ENST00000469867 CACNG4Q9UBN1 327 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 CARNS1A5YM72 827 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 POU5F1BQ06416 359 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 IER5LQ5T953 404 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 GSTCDQ8NEC7 633 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 UBN1Q9NPG3 1134 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
FAM228B-203ENST00000469867 DBR1Q9UK59 544 aaKnown RBP12.76□□□□□ -0.37
FAM228B-203ENST00000469867 NPTXRO95502 500 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 ASGR2P07307 311 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 ATAT1Q5SQI0 421 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 STAMQ92783 540 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 NFKBIZQ9BYH8 718 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 TUFT1Q9NNX1 390 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 NR2E1Q9Y466 385 aa12.75□□□□□ -0.37
FAM228B-203ENST00000469867 TDRD15B5MCY1 1934 aaKnown RBP12.75□□□□□ -0.37
FAM228B-203ENST00000469867 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 URODP06132 367 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
FAM228B-203ENST00000469867 RPA1P27694 616 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 ZNF165P49910 485 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 CLCN4P51793 760 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 ATP2C1P98194 919 aaPredicted RBP12.74□□□□□ -0.37
FAM228B-203ENST00000469867 DSC1Q08554 894 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 MCPH1Q8NEM0 835 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 SLC22A17Q8WUG5 538 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms