RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
THBS3-206ENST00000469769 MFSD5Q6N075 450 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 DPY19L2P1Q6NXN4 242 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 TMEM192Q8IY95 271 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 DBF4BQ8NFT6 615 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 PDLIM2Q96JY6 352 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 NXF3Q9H4D5 531 aaKnown RBP11.28□□□□□ -0.6
THBS3-206ENST00000469769 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
THBS3-206ENST00000469769 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 DERAQ9Y315 318 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 IPPQ9Y573 584 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 PCDHB2Q9Y5E7 798 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
THBS3-206ENST00000469769 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 TEX33O43247 280 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ADCY5O95622 1261 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 EOMESO95936 686 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 AFPP02771 609 aaKnown RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 KCNE1P15382 129 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ATF7P17544 494 aaPredicted RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 FMO5P49326 533 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 KCNMA1Q12791 1236 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ZACNQ401N2 412 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 SEZ6Q53EL9 994 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 TWF2Q6IBS0 349 aaKnown RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 SLC24A5Q71RS6 500 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 SEPT8Q92599 483 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 SNX27Q96L92 541 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 CGRRF1Q99675 332 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ADAM2Q99965 735 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 TRIM5Q9C035 493 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 VPS16Q9H269 839 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ELAC1Q9H777 363 aaKnown RBP11.27□□□□□ -0.61
THBS3-206ENST00000469769 TMEM8AQ9HCN3 771 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 SNTG2Q9NY99 539 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 SIK3Q9Y2K2 1263 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 C2CD2Q9Y426 696 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 ITIH6Q6UXX5 1313 aa11.27□□□□□ -0.61
THBS3-206ENST00000469769 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 ENPP3O14638 875 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 STX10O60499 249 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
THBS3-206ENST00000469769 RECQL4O94761 1208 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 TPM3P06753 285 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 TPM2P07951 284 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 PFKMP08237 780 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 CXCL8P10145 99 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 MATR3P43243 847 aaKnown RBP eCLIP11.26□□□□□ -0.61
THBS3-206ENST00000469769 CCL23P55773 120 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 CBWD6Q4V339 395 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 CBWD3Q5JTY5 395 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 CBWD5Q5RIA9 395 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 AGMOQ6ZNB7 445 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 ECHDC2Q86YB7 292 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 VSTM4Q8IW00 320 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 EFCAB13Q8IY85 973 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 LMO3Q8TAP4 145 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 CXorf38Q8TB03 319 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 SCLYQ96I15 445 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
THBS3-206ENST00000469769 TMEM117Q9H0C3 514 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 TOPORSQ9NS56 1045 aaPredicted RBP11.26□□□□□ -0.61
THBS3-206ENST00000469769 PTPRJQ12913 1337 aa11.26□□□□□ -0.61
THBS3-206ENST00000469769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.25□□□□□ -0.61
THBS3-206ENST00000469769 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 HARSP12081 509 aaKnown RBP11.25□□□□□ -0.61
THBS3-206ENST00000469769 RAG1P15918 1043 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 UBXN1Q04323 297 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 DUOXA2Q1HG44 320 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 EPC2Q52LR7 807 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 FIGNQ5HY92 759 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 KRT39Q6A163 491 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 CNKSR3Q6P9H4 555 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 HACE1Q8IYU2 909 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 CCDC127Q96BQ5 260 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
THBS3-206ENST00000469769 FNBP1Q96RU3 617 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 POP1Q99575 1024 aaKnown RBP11.25□□□□□ -0.61
THBS3-206ENST00000469769 HTATIP2Q9BUP3 242 aa11.25□□□□□ -0.61
THBS3-206ENST00000469769 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms