RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 CENPCQ03188 943 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GIT2Q14161 759 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GAS6Q14393 721 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 UGCGQ16739 394 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ODR4Q5SWX8 454 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 LILRA6Q6PI73 481 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 PRR23CQ6ZRP0 262 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GRASPQ7Z6J2 395 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 PPFIBP1Q86W92 1011 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 KSR1Q8IVT5 923 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 CKAP2LQ8IYA6 745 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 RNF168Q8IYW5 571 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ZNF654Q8IZM8 581 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GPR161Q8N6U8 529 aaKnown RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 SCG3Q8WXD2 468 aaKnown RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 MAP4K1Q92918 833 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GJA10Q969M2 543 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 CLDN23Q96B33 292 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 RRP36Q96EU6 259 aaKnown RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 RPS6KC1Q96S38 1066 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 FDXACB1Q9BRP7 624 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 BCO2Q9BYV7 579 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 TSPAN10Q9H1Z9 355 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 PIDD1Q9HB75 910 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 SEMA4GQ9NTN9 838 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 HCFC1R1Q9NWW0 138 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 C2orf42Q9NWW7 574 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 CACNG4Q9UBN1 327 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GABBR1Q9UBS5 961 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ANGPTL2Q9UKU9 493 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 PRG3Q9Y2Y8 225 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ADAMTS20P59510 1910 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ASPMQ8IZT6 3477 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ABCA7Q8IZY2 2146 aa5.96□□□□□ -1.45
PTPN4-209ENST00000469511 IGLV3-22A0A075B6J6 115 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SPDYE3A6NKU9 549 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 CYSRT1A8MQ03 144 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 E7EWF7 191 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 CAPN5O15484 640 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 ADAM12O43184 909 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TBC1D4O60343 1298 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SOD2P04179 222 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 PROS1P07225 676 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 IGFBP6P24592 240 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 KIF5BP33176 963 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SLC26A2P50443 739 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 RELBQ01201 579 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 RNASELQ05823 741 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TRAF1Q13077 416 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 NONOQ15233 471 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TLR1Q15399 786 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SF3A2Q15428 464 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 WDR44Q5JSH3 913 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 UBXN11Q5T124 520 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 FAM160B1Q5W0V3 765 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 WWC2Q6AWC2 1192 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TWF2Q6IBS0 349 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 PRSS55Q6UWB4 352 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 PRR23BQ6ZRT6 265 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TPRG1Q6ZUI0 275 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 PLA2G4DQ86XP0 818 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SLC9A9Q8IVB4 645 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 NETO1Q8TDF5 533 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 FGF13Q92913 245 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 TNPO1Q92973 898 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 NXPE3Q969Y0 559 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 CEP89Q96ST8 783 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 HERC2P3Q9BVR0 1158 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 EMILIN2Q9BXX0 1053 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 MRPL9Q9BYD2 267 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 ANO3Q9BYT9 981 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 GPR62Q9BZJ7 368 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 SMOC1Q9H4F8 434 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 CNNM2Q9H8M5 875 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 LY9Q9HBG7 655 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 PRMT8Q9NR22 394 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 HEBP1Q9NRV9 189 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 MRPL17Q9NRX2 175 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 FAM105AQ9NUU6 356 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 EGFL7Q9UHF1 273 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 GMEB2Q9UKD1 530 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 NDRG2Q9UN36 371 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 FAN1Q9Y2M0 1017 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 GCN1Q92616 2671 aaKnown RBP5.96□□□□□ -1.46
PTPN4-209ENST00000469511 NUP205Q92621 2012 aa5.96□□□□□ -1.46
PTPN4-209ENST00000469511 ASCC3Q8N3C0 2202 aaKnown RBP5.95□□□□□ -1.46
PTPN4-209ENST00000469511 PCNX2A6NKB5 2137 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 CHURC1-FNTBB4DL54 471 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 MEN1O00255 615 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 GIPC1O14908 333 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SPINT1O43278 529 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 STBD1O95210 358 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 PAPLNO95428 1278 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 GLUD1P00367 558 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 ALDH2P05091 517 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 URODP06132 367 aa5.95□□□□□ -1.46
PTPN4-209ENST00000469511 SCNN1AP37088 669 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms