RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TUSC3Q13454 348 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 PTPN14Q15678 1187 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 ANKRD54Q6NXT1 300 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 TMEM161BQ8NDZ6 487 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 EPSTI1Q96J88 318 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 REEP2Q9BRK0 252 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 FUCA2Q9BTY2 467 aa15.85■□□□□ 0.13
COL27A1-203ENST00000468565 PLXNA3P51805 1871 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 NPHP3-ACAD11A0A0J9YXS1 232 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 CCDC192P0DO97 292 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 MAPTP10636 758 aaKnown RBP15.84■□□□□ 0.13
COL27A1-203ENST00000468565 SCP2P22307 547 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 PROZP22891 400 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 CA8P35219 290 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 TXLNAP40222 546 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 ZNF131P52739 623 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 RBM10P98175 930 aaKnown RBP15.84■□□□□ 0.13
COL27A1-203ENST00000468565 STRN3Q13033 797 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 MCM6Q14566 821 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 ZNF568Q3ZCX4 644 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 USP49Q70CQ1 688 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 ADHFE1Q8IWW8 467 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 GJD3Q8N144 294 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 TARS2Q9BW92 718 aaKnown RBP15.84■□□□□ 0.13
COL27A1-203ENST00000468565 CDT1Q9H211 546 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 STK17AQ9UEE5 414 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 SSX2IPQ9Y2D8 614 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 C5orf42Q9H799 3197 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 PTGESO14684 152 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 THP07101 528 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 HOXB8P17481 243 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-203ENST00000468565 GRM5P41594 1212 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 ZP2Q05996 745 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 AUTS2Q8WXX7 1259 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 POP1Q99575 1024 aaKnown RBP15.84■□□□□ 0.13
COL27A1-203ENST00000468565 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
COL27A1-203ENST00000468565 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 ABLIM1O14639 778 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 LILRB3O75022 631 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 URODP06132 367 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 MCF2P10911 925 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.12
COL27A1-203ENST00000468565 NAB2Q15742 525 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 SPECC1Q5M775 1068 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 LLGL2Q6P1M3 1020 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 MPZL3Q6UWV2 235 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 ZPBP2Q6X784 338 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 PPFIBP1Q86W92 1011 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 KRI1Q8N9T8 703 aaKnown RBP15.83■□□□□ 0.12
COL27A1-203ENST00000468565 CLIC6Q96NY7 704 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 CCDC94Q9BW85 323 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-203ENST00000468565 EMILIN2Q9BXX0 1053 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 PARVGQ9HBI0 331 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 CD320Q9NPF0 282 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 MRPL17Q9NRX2 175 aaKnown RBP15.83■□□□□ 0.12
COL27A1-203ENST00000468565 USP15Q9Y4E8 981 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-203ENST00000468565 VWA8A3KMH1 1905 aa15.83■□□□□ 0.12
COL27A1-203ENST00000468565 FAM13AO94988 1023 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 KRT18P05783 430 aaKnown RBP15.82■□□□□ 0.12
COL27A1-203ENST00000468565 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 GPR65Q8IYL9 337 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 SUSD6Q92537 303 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 S1PR5Q9H228 398 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 TNMDQ9H2S6 317 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 TOPORSQ9NS56 1045 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-203ENST00000468565 ADAM28Q9UKQ2 775 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 TOM1L1O75674 476 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 SSTR3P32745 418 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-203ENST00000468565 ABCD1P33897 745 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 GLUD2P49448 558 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 YARSP54577 528 aaKnown RBP15.82■□□□□ 0.12
COL27A1-203ENST00000468565 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-203ENST00000468565 STK38Q15208 465 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 XKR4Q5GH76 650 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 FUT10Q6P4F1 479 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 LINC00301Q8NCQ3 95 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 KLHL5Q96PQ7 755 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 TCHPQ9BT92 498 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 CXCL16Q9H2A7 254 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 CLSTN2Q9H4D0 955 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 DZANK1Q9NVP4 752 aa15.82■□□□□ 0.12
COL27A1-203ENST00000468565 F8W810 466 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 PPP6R2O75170 966 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 TBCAO75347 108 aaKnown RBP15.81■□□□□ 0.12
COL27A1-203ENST00000468565 PTMAP06454 111 aaKnown RBP15.81■□□□□ 0.12
COL27A1-203ENST00000468565 DSG1Q02413 1049 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 KIAA0319Q5VV43 1072 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 RRAGBQ5VZM2 374 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 MYCT1Q8N699 235 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 CEP120Q8N960 986 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 PPP1R10Q96QC0 940 aaKnown RBP15.81■□□□□ 0.12
COL27A1-203ENST00000468565 CHST7Q9NS84 486 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 RCOR1Q9UKL0 485 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 DENND4AQ7Z401 1863 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 C2orf16Q68DN1 1984 aa15.81■□□□□ 0.12
COL27A1-203ENST00000468565 CASTOR2A6NHX0 329 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms