RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PARVGQ9HBI0 331 aa19.89■□□□□ 0.77
CGREF1-208ENST00000467539 TOPORSQ9NS56 1045 aaPredicted RBP19.89■□□□□ 0.77
CGREF1-208ENST00000467539 TDRD15B5MCY1 1934 aaKnown RBP19.88■□□□□ 0.77
CGREF1-208ENST00000467539 SMIM28A0A1B0GU29 152 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 CASTOR2A6NHX0 329 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 GPR37L1O60883 481 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 FAM13AO94988 1023 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 RRAGBQ5VZM2 374 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 DCLRE1AQ6PJP8 1040 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 KRI1Q8N9T8 703 aaKnown RBP19.88■□□□□ 0.77
CGREF1-208ENST00000467539 FBXL18Q96ME1 805 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 ZNF396Q96N95 335 aaPredicted RBP19.88■□□□□ 0.77
CGREF1-208ENST00000467539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.88■□□□□ 0.77
CGREF1-208ENST00000467539 FNIP2Q9P278 1114 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 CACNG4Q9UBN1 327 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 STK17AQ9UEE5 414 aa19.88■□□□□ 0.77
CGREF1-208ENST00000467539 TEX28O15482 410 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 CLDN3O15551 220 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 TRAK2O60296 914 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 KRT18P05783 430 aaKnown RBP19.87■□□□□ 0.77
CGREF1-208ENST00000467539 ADH1AP07327 375 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 TXLNAP40222 546 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 OSTNP61366 133 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 MCL1Q07820 350 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 RNF135Q8IUD6 432 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 C12orf76Q8N812 135 aaPredicted RBP19.87■□□□□ 0.77
CGREF1-208ENST00000467539 LINC00301Q8NCQ3 95 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 UROC1Q96N76 676 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 NECTIN4Q96NY8 510 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 TFIP11Q9UBB9 837 aaKnown RBP19.87■□□□□ 0.77
CGREF1-208ENST00000467539 TBX20Q9UMR3 447 aa19.87■□□□□ 0.77
CGREF1-208ENST00000467539 SF3B1O75533 1304 aaKnown RBP eCLIP19.86■□□□□ 0.77
CGREF1-208ENST00000467539 DCXO43602 365 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 HSP90AA1P07900 732 aaKnown RBP19.86■□□□□ 0.77
CGREF1-208ENST00000467539 KCNE1P15382 129 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 ABCD1P33897 745 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 MTHFRP42898 656 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 ATAT1Q5SQI0 421 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 RARS2Q5T160 578 aaKnown RBP19.86■□□□□ 0.77
CGREF1-208ENST00000467539 SV2BQ7L1I2 683 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 HDAC7Q8WUI4 952 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 RPGRIP1Q96KN7 1286 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 RIPOR3Q96MK2 946 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 FIZ1Q96SL8 496 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 DPP7Q9UHL4 492 aa19.86■□□□□ 0.77
CGREF1-208ENST00000467539 TMEM189-UBE2V1I3L0A0 370 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 PPP6R2O75170 966 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 KIF4AO95239 1232 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 GTF2BQ00403 316 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 ELAVL2Q12926 359 aaKnown RBP19.85■□□□□ 0.77
CGREF1-208ENST00000467539 STK38Q15208 465 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 UPP1Q16831 310 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 HERC4Q5GLZ8 1057 aaPredicted RBP19.85■□□□□ 0.77
CGREF1-208ENST00000467539 GLRA4Q5JXX5 417 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 FAM171A1Q5VUB5 890 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 KANK3Q6NY19 840 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 LILRA6Q6PI73 481 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 CCDC73Q6ZRK6 1079 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 RIN2Q8WYP3 895 aaPredicted RBP19.85■□□□□ 0.77
CGREF1-208ENST00000467539 DDX27Q96GQ7 796 aaKnown RBP19.85■□□□□ 0.77
CGREF1-208ENST00000467539 B3GALT6Q96L58 329 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 ZMAT2Q96NC0 199 aaKnown RBP19.85■□□□□ 0.77
CGREF1-208ENST00000467539 TTPALQ9BTX7 342 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 SLC38A7Q9NVC3 462 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 CNTN3Q9P232 1028 aa19.85■□□□□ 0.77
CGREF1-208ENST00000467539 SPTLC2O15270 562 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 TBCAO75347 108 aaKnown RBP19.84■□□□□ 0.77
CGREF1-208ENST00000467539 B3GAT3O94766 335 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 PIGRP01833 764 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 ZSCAN22P10073 491 aaPredicted RBP19.84■□□□□ 0.77
CGREF1-208ENST00000467539 CLCNKBP51801 687 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 CREMQ03060 361 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 NOLC1Q14978 699 aaKnown RBP eCLIP19.84■□□□□ 0.77
CGREF1-208ENST00000467539 SLC10A6Q3KNW5 377 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 TMEM31Q5JXX7 168 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 CD300LGQ6UXG3 332 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 GPR149Q86SP6 731 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 LNX1Q8TBB1 728 aaPredicted RBP19.84■□□□□ 0.77
CGREF1-208ENST00000467539 DDX12PQ92771 950 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 SNX27Q96L92 541 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 PANK2Q9BZ23 570 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 HAPLN2Q9GZV7 340 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 ST6GALNAC4Q9H4F1 302 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 ZHX3Q9H4I2 956 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 SFXN1Q9H9B4 322 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 PLEKHA5Q9HAU0 1116 aa19.84■□□□□ 0.77
CGREF1-208ENST00000467539 MEFVO15553 781 aaPredicted RBP19.83■□□□□ 0.77
CGREF1-208ENST00000467539 CLTAP09496 248 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 IGFBP6P24592 240 aaPredicted RBP19.83■□□□□ 0.77
CGREF1-208ENST00000467539 RPL9P32969 192 aaKnown RBP19.83■□□□□ 0.77
CGREF1-208ENST00000467539 KYAT1Q16773 422 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 RTP2Q5QGT7 225 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 PDXDC1Q6P996 788 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 TMC5Q6UXY8 1006 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 DYMQ7RTS9 669 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 ZNF720Q7Z2F6 126 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 PALB2Q86YC2 1186 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 CMASQ8NFW8 434 aaPredicted RBP19.83■□□□□ 0.77
CGREF1-208ENST00000467539 HASPINQ8TF76 798 aa19.83■□□□□ 0.77
CGREF1-208ENST00000467539 PIK3R5Q8WYR1 880 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms