RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 CHST7Q9NS84 486 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 HCFC1R1Q9NWW0 138 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 MARCH5Q9NX47 278 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 SLC9A2Q9UBY0 812 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 STK39Q9UEW8 545 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 MAD2L2Q9UI95 211 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 BRPF3Q9ULD4 1205 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 VPS9D1Q9Y2B5 631 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 SSX2IPQ9Y2D8 614 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 RAXQ9Y2V3 346 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 PCDHGA5Q9Y5G8 931 aa4.82□□□□□ -1.64
CPS1-205ENST00000467353 LAMA4Q16363 1823 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 NEDD4P46934 1319 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PNMA6FA0A0J9YX94 578 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 B4E1Z4 1266 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 CCL16O15467 120 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 EXTL3O43909 919 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZNF623O75123 536 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 DXOO77932 396 aaKnown RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 CAVIN2O95810 425 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 CCNE2O96020 404 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 FCARP24071 287 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 SLC26A2P50443 739 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 SIM1P81133 766 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 DSG1Q02413 1049 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ITGB3BPQ13352 177 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PLK5Q496M5 336 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ALKBH2Q6NS38 261 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 SWSAP1Q6NVH7 229 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ABHD15Q6UXT9 468 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 AGMOQ6ZNB7 445 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 TRMT1LQ7Z2T5 733 aaKnown RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 BPHLQ86WA6 291 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 MAP4K3Q8IVH8 894 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZNF843Q8N446 348 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 LINC01465Q8N7H1 131 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 SMARCC2Q8TAQ2 1214 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PIBF1Q8WXW3 757 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PIK3R5Q8WYR1 880 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 DNASE1L2Q92874 299 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ELSPBP1Q96BH3 223 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 MBOAT7Q96N66 472 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 CITED4Q96RK1 184 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 TMEM175Q9BSA9 504 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 GPR62Q9BZJ7 368 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 DUSP15Q9H1R2 295 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 RIOX1Q9H6W3 641 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 BRD9Q9H8M2 597 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZNF334Q9HCZ1 680 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 CHST12Q9NRB3 414 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 KCNH7Q9NS40 1196 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZBTB40Q9NUA8 1239 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 DACT1Q9NYF0 836 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZSWIM5Q9P217 1185 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 DNMT3BQ9UBC3 853 aaKnown RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 POLIQ9UNA4 740 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PRG3Q9Y2Y8 225 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 PIAS3Q9Y6X2 628 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 USP9XQ93008 2570 aaPredicted RBP4.81□□□□□ -1.64
CPS1-205ENST00000467353 ZNF462Q96JM2 2506 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 PATJQ8NI35 1801 aa4.81□□□□□ -1.64
CPS1-205ENST00000467353 COL1A2P08123 1366 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 BCLAF3A2AJT9 711 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 SFI1A8K8P3 1242 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PATE3B3GLJ2 98 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 J3QKU1 62 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 TK2O00142 265 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 BACH1O14867 736 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 DCLK1O15075 740 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 MAFGO15525 162 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 MEFVO15553 781 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 POMCP01189 267 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 HNRNPA1P09651 372 aaKnown RBP eCLIP4.8□□□□□ -1.64
CPS1-205ENST00000467353 CCDC192P0DO97 292 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PCP11498 1178 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 GPC3P51654 580 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FAM193AP78312 1265 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 IRX4P78413 519 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 CREB5Q02930 508 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 SRSF1Q07955 248 aaKnown RBP eCLIP4.8□□□□□ -1.64
CPS1-205ENST00000467353 TRAF1Q13077 416 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 SLC5A9Q2M3M2 681 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FAM78AQ5JUQ0 283 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PPM1LQ5SGD2 360 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 EFCAB12Q6NXP0 572 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PKN3Q6P5Z2 889 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PRSS55Q6UWB4 352 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 RAB44Q7Z6P3 723 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 MRPL10Q7Z7H8 261 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 IQCA1Q86XH1 822 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 CCDC60Q8IWA6 550 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 MDM1Q8TC05 714 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PI4K2BQ8TCG2 481 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 RSPH1Q8WYR4 309 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FAM227BQ96M60 508 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms