RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 PDRG1Q9NUG6 133 aa21.29■■□□□ 1
FAM53A-204ENST00000467215 HCFC1R1Q9NWW0 138 aa21.29■■□□□ 1
FAM53A-204ENST00000467215 PDCD11Q14690 1871 aaKnown RBP21.28■■□□□ 1
FAM53A-204ENST00000467215 KANSL1LA0AUZ9 987 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 KINO60870 393 aaKnown RBP21.28■■□□□ 1
FAM53A-204ENST00000467215 RECQL4O94761 1208 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 HOXA9P31269 272 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 PUM1Q14671 1186 aaKnown RBP eCLIP21.28■■□□□ 1
FAM53A-204ENST00000467215 NAB2Q15742 525 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 CALCRLQ16602 461 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 MTSS1LQ765P7 747 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 NPAS3Q8IXF0 933 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 ING5Q8WYH8 240 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 SHDQ96IW2 340 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
FAM53A-204ENST00000467215 PDZD7Q9H5P4 517 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
FAM53A-204ENST00000467215 MTF2Q9Y483 593 aaPredicted RBP21.28■■□□□ 1
FAM53A-204ENST00000467215 CITO14578 2027 aa21.28■■□□□ 1
FAM53A-204ENST00000467215 CTDNEP1O95476 244 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 EDN1P05305 212 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 KRT2P35908 639 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 CDCA2Q69YH5 1023 aaPredicted RBP21.27■■□□□ 1
FAM53A-204ENST00000467215 TTC12Q9H892 705 aaPredicted RBP21.27■■□□□ 1
FAM53A-204ENST00000467215 LTB4R2Q9NPC1 389 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 PRMT7Q9NVM4 692 aaPredicted RBP21.27■■□□□ 1
FAM53A-204ENST00000467215 SNTG2Q9NY99 539 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 PCDHA12Q9UN75 941 aa21.27■■□□□ 1
FAM53A-204ENST00000467215 SPTBN2O15020 2390 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 CACNA1BQ00975 2339 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 LAMTOR5O43504 91 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 XYLBO75191 536 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 CD72P21854 359 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 PRIMPOLQ96LW4 560 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 BCO2Q9BYV7 579 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 DLL3Q9NYJ7 618 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 ORC3Q9UBD5 711 aaPredicted RBP21.26■□□□□ 0.99
FAM53A-204ENST00000467215 TPCN1Q9ULQ1 816 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 USP20Q9Y2K6 914 aa21.26■□□□□ 0.99
FAM53A-204ENST00000467215 NEMFO60524 1076 aa21.25■□□□□ 0.99
FAM53A-204ENST00000467215 THP07101 528 aa21.25■□□□□ 0.99
FAM53A-204ENST00000467215 PRKCQQ04759 706 aa21.25■□□□□ 0.99
FAM53A-204ENST00000467215 AXDND1Q5T1B0 1012 aaPredicted RBP21.25■□□□□ 0.99
FAM53A-204ENST00000467215 ZBTB8OSQ8IWT0 167 aa21.25■□□□□ 0.99
FAM53A-204ENST00000467215 BSNDQ8WZ55 320 aa21.25■□□□□ 0.99
FAM53A-204ENST00000467215 N4BP3O15049 544 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 SPTLC1O15269 473 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 EPB41L2O43491 1005 aaKnown RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 PFKFB2O60825 505 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 IGFBP6P24592 240 aaPredicted RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 TARSP26639 723 aaKnown RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 TXKP42681 527 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 FOSBP53539 338 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 TMEM132AQ24JP5 1023 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 PABPC1LQ4VXU2 614 aaKnown RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 SLC44A4Q53GD3 710 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 GLRA4Q5JXX5 417 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 EEF1DP3Q658K8 133 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 TPRG1Q6ZUI0 275 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 NOSTRINQ8IVI9 506 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 FZD8Q9H461 694 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 NCDNQ9UBB6 729 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 DNMT3BQ9UBC3 853 aaKnown RBP21.24■□□□□ 0.99
FAM53A-204ENST00000467215 MTRRQ9UBK8 725 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 FBXO4Q9UKT5 387 aa21.24■□□□□ 0.99
FAM53A-204ENST00000467215 PRKCBP05771 671 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 POU2F2P09086 479 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 LIG1P18858 919 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 OR1D2P34982 312 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 CSTF1Q05048 431 aaKnown RBP21.23■□□□□ 0.99
FAM53A-204ENST00000467215 ELAVL2Q12926 359 aaKnown RBP21.23■□□□□ 0.99
FAM53A-204ENST00000467215 FAM187BQ17R55 369 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 RSPO4Q2I0M5 234 aaPredicted RBP21.23■□□□□ 0.99
FAM53A-204ENST00000467215 ZNF528Q3MIS6 628 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 RSPO2Q6UXX9 243 aaPredicted RBP21.23■□□□□ 0.99
FAM53A-204ENST00000467215 BRMS1Q9HCU9 246 aa21.23■□□□□ 0.99
FAM53A-204ENST00000467215 FAM170BA6NMN3 283 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 SPATA31C1P0DKV0 1188 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 FDPSP14324 419 aaKnown RBP21.22■□□□□ 0.99
FAM53A-204ENST00000467215 PFKPQ01813 784 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 PRPF4BQ13523 1007 aaKnown RBP21.22■□□□□ 0.99
FAM53A-204ENST00000467215 RAB33AQ14088 237 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 SLC5A9Q2M3M2 681 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 PDXDC1Q6P996 788 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 MCPH1Q8NEM0 835 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 DDX27Q96GQ7 796 aaKnown RBP21.22■□□□□ 0.99
FAM53A-204ENST00000467215 OSBPL6Q9BZF3 934 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 CCDC113Q9H0I3 377 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 GOLGA2P5Q9HBQ8 144 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 SMG5Q9UPR3 1016 aaKnown RBP21.22■□□□□ 0.99
FAM53A-204ENST00000467215 GDAQ9Y2T3 454 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 CDY1Q9Y6F8 540 aa21.22■□□□□ 0.99
FAM53A-204ENST00000467215 MED24O75448 989 aa21.21■□□□□ 0.99
FAM53A-204ENST00000467215 LARGE1O95461 756 aa21.21■□□□□ 0.99
FAM53A-204ENST00000467215 FGFR3P22607 806 aa21.21■□□□□ 0.99
FAM53A-204ENST00000467215 TKTP29401 623 aaKnown RBP21.21■□□□□ 0.99
FAM53A-204ENST00000467215 VARS2Q5ST30 1063 aaKnown RBP21.21■□□□□ 0.99
FAM53A-204ENST00000467215 TSSK4Q6SA08 328 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms