RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PARD6AQ9NPB6 346 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 TOPORSQ9NS56 1045 aaPredicted RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 EHD2Q9NZN4 543 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
CXXC4-202ENST00000466963 DOCK8Q8NF50 2099 aa6.33□□□□□ -1.4
CXXC4-202ENST00000466963 ARL5CA6NH57 179 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SGSM2O43147 1006 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ZBTB43O43298 467 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 APBB3O95704 486 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 DCNP07585 359 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SP4Q02446 784 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 POTEHQ6S545 545 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SLC36A4Q6YBV0 504 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SCUBE3Q8IX30 993 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 C12orf76Q8N812 135 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 BEST2Q8NFU1 509 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 PCED1AQ9H1Q7 454 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 C17orf75Q9HAS0 396 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM9BQ9NQ34 198 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 PCDHGB2Q9Y5G2 931 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 A0A1B0GUA9 196 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 K7ESF4 209 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TRDMT1O14717 391 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 MARCH6O60337 910 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ALDH1A2O94788 518 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CYP3A5P20815 502 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 EIF2DP41214 584 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CLCN3P51790 818 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 MTAPQ13126 283 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 XKR4Q5GH76 650 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 FERMT3Q86UX7 667 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CD302Q8IX05 232 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 PPP1R13LQ8WUF5 828 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF512Q96ME7 567 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ASB16Q96NS5 453 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 MTRQ99707 1265 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 P2RY13Q9BPV8 354 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TRIM6Q9C030 488 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 LMAN1LQ9HAT1 526 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SLC8A2Q9UPR5 921 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 IPPQ9Y573 584 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 PDCD11Q14690 1871 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 EVPLQ92817 2033 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 ARID2Q68CP9 1835 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 C2CD2LO14523 706 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 RPP40O75818 363 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 THP07101 528 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CYP21A2P08686 494 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CDC25CP30307 473 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 OR1G1P47890 313 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM62Q0P6H9 643 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 NR1H3Q13133 447 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 RNF43Q68DV7 783 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CDCA2Q69YH5 1023 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CWC27Q6UX04 472 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 PDZD4Q76G19 769 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TRMT11Q7Z4G4 463 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 GLRX5Q86SX6 157 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 FAM160A2Q8N612 972 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 LNX1Q8TBB1 728 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SRRTQ9BXP5 876 aaKnown RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM121BQ9BXQ6 578 aaPredicted RBP6.32□□□□□ -1.4
CXXC4-202ENST00000466963 CPVLQ9H3G5 476 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 IFT122Q9HBG6 1241 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SUSD2Q9UGT4 822 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 SAMM50Q9Y512 469 aa6.32□□□□□ -1.4
CXXC4-202ENST00000466963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TNFRSF10BO14763 440 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 DDHD2O94830 711 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 STBD1O95210 358 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 ATF2P15336 505 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 MCM2P49736 904 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 FUT2Q10981 343 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 GRSF1Q12849 480 aaKnown RBP eCLIP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TRAPPC12Q8WVT3 735 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 SEPT9Q9UHD8 586 aaPredicted RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 DSEQ9UL01 958 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 LHX6Q9UPM6 363 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 CACNA1HO95180 2353 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 A0A087WZ62 844 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 BCLAF3A2AJT9 711 aaKnown RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TYMPP19971 482 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 EVCP57679 992 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 CYP4A11Q02928 519 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TTC22Q5TAA0 569 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF280DQ6N043 979 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 PARM1Q6UWI2 310 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 SYT13Q7L8C5 426 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 SMG8Q8ND04 991 aaKnown RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 WASF1Q92558 559 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 FDXACB1Q9BRP7 624 aaPredicted RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM206Q9H813 350 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms