RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SHTN1A0MZ66 631 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 ADH4P08319 380 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 ZSCAN20P17040 1043 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 FPR1P21462 350 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 C5AR1P21730 350 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 WASP42768 502 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 ALDH1A3P47895 512 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 RNASE9P60153 205 aaKnown RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 RAP2BP61225 183 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 FAM189BP81408 668 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 FHL2Q14192 279 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 PTPROQ16827 1216 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 RRP12Q5JTH9 1297 aaKnown RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 METRNLQ641Q3 311 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 RHOUQ7L0Q8 258 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 MRGPREQ86SM8 312 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 CCHCR1Q8TD31 782 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 CASKIN2Q8WXE0 1202 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 LARP4BQ92615 738 aaKnown RBP5.25□□□□□ -1.57
VPS13D-203ENST00000466732 LENG9Q96B70 501 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 SLC46A2Q9BY10 475 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 TMEM140Q9NV12 185 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 INTUQ9ULD6 942 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 FZD1Q9UP38 647 aa5.25□□□□□ -1.57
VPS13D-203ENST00000466732 DRGXA6NNA5 263 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 DIRC3C9JPN6 131 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 ZNF185O15231 689 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 PCSK1P29120 753 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 CHN2P52757 468 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 KRT85P78386 507 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 FAM102AQ5T9C2 384 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-203ENST00000466732 OTUD7BQ6GQQ9 843 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 SYNE4Q8N205 404 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 AMER2Q8N7J2 671 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 GPATCH3Q96I76 525 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 C7orf25Q9BPX7 421 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 MRIQ9BWK5 157 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 TEX101Q9BY14 249 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 MANSC1Q9H8J5 431 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 MRFAP1Q9Y605 127 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 ACTL7AQ9Y615 435 aa5.24□□□□□ -1.57
VPS13D-203ENST00000466732 TNKSO95271 1327 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ANKRD62A6NC57 917 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 GPR32O75388 356 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 NCR1O76036 304 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 AMY1AP04745 511 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ITGB1P05556 798 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ATP5JP18859 108 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 MTM1Q13496 603 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 PDCD4Q53EL6 469 aaKnown RBP5.23□□□□□ -1.57
VPS13D-203ENST00000466732 LRRC55Q6ZSA7 311 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ZNF627Q7L945 461 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ZGPATQ8N5A5 531 aaKnown RBP5.23□□□□□ -1.57
VPS13D-203ENST00000466732 PHACTR3Q96KR7 559 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 TEKT5Q96M29 485 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 NEU1Q99519 415 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 MYOCQ99972 504 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 ASPSCR1Q9BZE9 553 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 BRINP2Q9C0B6 783 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 AKIP1Q9NQ31 210 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 SLC23A1Q9UHI7 598 aa5.23□□□□□ -1.57
VPS13D-203ENST00000466732 SAP30BPQ9UHR5 308 aaKnown RBP5.23□□□□□ -1.57
VPS13D-203ENST00000466732 USP15Q9Y4E8 981 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-203ENST00000466732 MYBBP1AQ9BQG0 1328 aaKnown RBP5.23□□□□□ -1.57
VPS13D-203ENST00000466732 RNASET2O00584 256 aaKnown RBP5.22□□□□□ -1.57
VPS13D-203ENST00000466732 TEX33O43247 280 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 POMCP01189 267 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 LAG3P18627 525 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 HMGA2P52926 109 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 SLC16A1P53985 500 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 ATP8B2P98198 1209 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 PTPN21Q16825 1174 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 TIGD2Q4W5G0 525 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 ZNF529Q6P280 563 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 SEM1Q6ZVN7 128 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 PNMA8AQ86V59 439 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-203ENST00000466732 PLXDC1Q8IUK5 500 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 RHOT1Q8IXI2 618 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 FAM177A1Q8N128 213 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-203ENST00000466732 SMAD5Q99717 465 aaKnown RBP5.22□□□□□ -1.57
VPS13D-203ENST00000466732 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 SLC13A1Q9BZW2 595 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 HOMER2Q9NSB8 354 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 RUVBL1Q9Y265 456 aaKnown RBP5.22□□□□□ -1.57
VPS13D-203ENST00000466732 HS3ST4Q9Y661 456 aa5.22□□□□□ -1.57
VPS13D-203ENST00000466732 GAGE12BA1L429 117 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 GAGE12HA6NDE8 117 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 HTRA2O43464 458 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-203ENST00000466732 PPFIA4O75335 1185 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 ABHD16AO95870 558 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 SPATA31D3P0C874 917 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 DDCP20711 480 aa5.21□□□□□ -1.58
VPS13D-203ENST00000466732 IBSPP21815 317 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-203ENST00000466732 KIF23Q02241 960 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms