RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PPP1R10Q96QC0 940 aaKnown RBP17.42■□□□□ 0.38
CRAMP1-204ENST00000466562 LRFN3Q9BTN0 628 aa17.42■□□□□ 0.38
CRAMP1-204ENST00000466562 MUTYHQ9UIF7 546 aa17.42■□□□□ 0.38
CRAMP1-204ENST00000466562 TDRD15B5MCY1 1934 aaKnown RBP17.42■□□□□ 0.38
CRAMP1-204ENST00000466562 SMIM28A0A1B0GU29 152 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 FAM86C2PA6NEL3 165 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 TOM1L1O75674 476 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 ADH1AP07327 375 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 WEE2P0C1S8 567 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 COL9A1P20849 921 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 ZNF131P52739 623 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 YARSP54577 528 aaKnown RBP17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 HERC4Q5GLZ8 1057 aaPredicted RBP17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 ZPBP2Q6X784 338 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 GPR65Q8IYL9 337 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 KCNN1Q92952 543 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 NECTIN4Q96NY8 510 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 POMKQ9H5K3 350 aa17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 TOPORSQ9NS56 1045 aaPredicted RBP17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 MORC2Q9Y6X9 1032 aaPredicted RBP17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 SF3B1O75533 1304 aaKnown RBP eCLIP17.41■□□□□ 0.38
CRAMP1-204ENST00000466562 H0YCG3 227 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 FAM13AO94988 1023 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 HARSP12081 509 aaKnown RBP17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 MTHFRP42898 656 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 SLC39A14Q15043 492 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 RTP2Q5QGT7 225 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 ATAT1Q5SQI0 421 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 TMC5Q6UXY8 1006 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 MYCT1Q8N699 235 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 FEZF2Q8TBJ5 459 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 RIN2Q8WYP3 895 aaPredicted RBP17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 RIPOR3Q96MK2 946 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 ACAP3Q96P50 834 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 PARVGQ9HBI0 331 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 CCDC39Q9UFE4 941 aa17.4■□□□□ 0.38
CRAMP1-204ENST00000466562 TRAK2O60296 914 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 GLUD1P00367 558 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 CLCNKBP51801 687 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 NOLC1Q14978 699 aaKnown RBP eCLIP17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 FAM171A1Q5VUB5 890 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 SNX27Q96L92 541 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 ZMAT2Q96NC0 199 aaKnown RBP17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 FIZ1Q96SL8 496 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 GOLGA2P5Q9HBQ8 144 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 FNIP2Q9P278 1114 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 ANKFY1Q9P2R3 1169 aa17.39■□□□□ 0.37
CRAMP1-204ENST00000466562 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 TMEM189-UBE2V1I3L0A0 370 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 K7ENM7 598 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 CLDN3O15551 220 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 B3GAT3O94766 335 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 C1RP00736 705 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 KCNE1P15382 129 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 RPL17P18621 184 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 SP100P23497 879 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 IGFBP6P24592 240 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 SOX4Q06945 474 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 MCL1Q07820 350 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 ELAVL2Q12926 359 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 UPP1Q16831 310 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 SEZ6Q53EL9 994 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 RRAGBQ5VZM2 374 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 DCLRE1AQ6PJP8 1040 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 PRSS55Q6UWB4 352 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 GPR149Q86SP6 731 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 CEP57Q86XR8 500 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 PALB2Q86YC2 1186 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 UROC1Q96N76 676 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 MAN1C1Q9NR34 630 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 STK17AQ9UEE5 414 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 TBX20Q9UMR3 447 aa17.38■□□□□ 0.37
CRAMP1-204ENST00000466562 PRR33A8MZF0 331 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 TGM5O43548 720 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 SCP2P22307 547 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 TXLNAP40222 546 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 CREMQ03060 361 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 LILRA6Q6PI73 481 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 C15orf39Q6ZRI6 1047 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 GLYCTKQ8IVS8 523 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 LINC00301Q8NCQ3 95 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 LNX1Q8TBB1 728 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 PIK3R5Q8WYR1 880 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 BICD1Q96G01 975 aa17.37■□□□□ 0.37
CRAMP1-204ENST00000466562 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms