RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
VPS16-206ENST00000466415 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 LPIN1Q14693 890 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 C1orf220Q5T0J3 134 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 CD302Q8IX05 232 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
VPS16-206ENST00000466415 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 SNTG2Q9NY99 539 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 CEP72Q9P209 647 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 HTTP42858 3142 aa13.13□□□□□ -0.31
VPS16-206ENST00000466415 TTC26A0AVF1 554 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 PMM2O15305 246 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 CD4P01730 458 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 SLC9A1P19634 815 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 PON1P27169 355 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 KRT9P35527 623 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
VPS16-206ENST00000466415 RAB27AP51159 221 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 WNT7BP56706 349 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 MCCD1P59942 119 aaPredicted RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 ZBED6P86452 979 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 TRIM65Q6PJ69 517 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 IMPG2Q9BZV3 1241 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 ASB7Q9H672 318 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 ZNHIT6Q9NWK9 470 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 PARP2Q9UGN5 583 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 CAPN11Q9UMQ6 739 aa13.12□□□□□ -0.31
VPS16-206ENST00000466415 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
VPS16-206ENST00000466415 PCNTO95613 3336 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 RECQL4O94761 1208 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 COL6A1P12109 1028 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 ACTN1P12814 892 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 RFX1P22670 979 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 CLDN10P78369 228 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 TRPC3Q13507 836 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 TMEM132DQ14C87 1099 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 DUOXA2Q1HG44 320 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 ZACNQ401N2 412 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 TDRD10Q5VZ19 366 aaKnown RBP13.11□□□□□ -0.31
VPS16-206ENST00000466415 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
VPS16-206ENST00000466415 SNX27Q96L92 541 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 TOX2Q96NM4 488 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
VPS16-206ENST00000466415 GANQ9H2C0 597 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
VPS16-206ENST00000466415 PLEKHA5Q9HAU0 1116 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 NLRC4Q9NPP4 1024 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 FAM105AQ9NUU6 356 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 APEX2Q9UBZ4 518 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 IPPQ9Y573 584 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
VPS16-206ENST00000466415 EPHB6O15197 1021 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 XPOTO43592 962 aaKnown RBP13.1□□□□□ -0.31
VPS16-206ENST00000466415 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 C4BPAP04003 597 aaKnown RBP13.1□□□□□ -0.31
VPS16-206ENST00000466415 NFICP08651 508 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 SKIP12755 728 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 ITGA4P13612 1032 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 UCHL3P15374 230 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
VPS16-206ENST00000466415 TLE2Q04725 743 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 LRMPQ12912 555 aa13.1□□□□□ -0.31
VPS16-206ENST00000466415 RAPGEF1Q13905 1077 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms