RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 NPEPPSP55786 919 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 MEF2AQ02078 507 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-211ENST00000466054 MCL1Q07820 350 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 PCBP2Q15366 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
LRCH3-211ENST00000466054 TMEM240Q5SV17 173 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 GJC2Q5T442 439 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-211ENST00000466054 Q6YL49 198 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 PNMA8AQ86V59 439 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-211ENST00000466054 FATE1Q969F0 183 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
LRCH3-211ENST00000466054 C2orf78A6NCI8 922 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 IKBKBO14920 756 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 TRIM24O15164 1050 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA12O60330 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 SNUPNO95149 360 aaKnown RBP5.69□□□□□ -1.5
LRCH3-211ENST00000466054 CLUL1Q15846 466 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 BTNL9Q6UXG8 535 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 CLEC14AQ86T13 490 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 TSPEARQ8WU66 669 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 FDXACB1Q9BRP7 624 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-211ENST00000466054 ACE2Q9BYF1 805 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-211ENST00000466054 EPC1Q9H2F5 836 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 TCF7L1Q9HCS4 588 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA8Q9Y5G5 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA7Q9Y5G6 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA6Q9Y5G7 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA3Q9Y5H0 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
LRCH3-211ENST00000466054 MYADML2A6NDP7 307 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 TOX4O94842 621 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 LY86O95711 162 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 VSIG10L2P0DP72 767 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 GAAP10253 952 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 ELLP55199 621 aaPredicted RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 CDK17Q00537 523 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 CD69Q07108 199 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 MGAT5Q09328 741 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 DCAF17Q5H9S7 520 aaPredicted RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 EFCAB2Q5VUJ9 269 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 FAM180AQ6UWF9 173 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 CMTR2Q8IYT2 770 aaKnown RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 PLA2G15Q8NCC3 412 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 SMG7Q92540 1137 aaKnown RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 JADE3Q92613 823 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 HOOK2Q96ED9 719 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 UIMC1Q96RL1 719 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 SERHL2Q9H4I8 314 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 C14orf93Q9H972 538 aaKnown RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 AASDHPPTQ9NRN7 309 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 ANKFY1Q9P2R3 1169 aa5.68□□□□□ -1.5
LRCH3-211ENST00000466054 THRAP3Q9Y2W1 955 aaKnown RBP5.68□□□□□ -1.5
LRCH3-211ENST00000466054 COL4A3Q01955 1670 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 CENPVL1A0A0U1RR11 272 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 A0A1W2PR48 441 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 MTSS1O43312 755 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 JUNP05412 331 aaKnown RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 LTA4HP09960 611 aaKnown RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 OSMP13725 252 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 HNRNPLP14866 589 aaKnown RBP eCLIP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 VCAM1P19320 739 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 CXCR5P32302 372 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 ZEB1P37275 1124 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 MALLQ13021 153 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 ACAP2Q15057 778 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 ADRM1Q16186 407 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 NAIF1Q69YI7 327 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 TAS1R1Q7RTX1 841 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 JDP2Q8WYK2 163 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 TEKT5Q96M29 485 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 WDR11Q9BZH6 1224 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 GREM2Q9H772 168 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 SCOCQ9UIL1 159 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 ZBTB21Q9ULJ3 1066 aa5.67□□□□□ -1.5
LRCH3-211ENST00000466054 LUC7L2Q9Y383 392 aaKnown RBP5.67□□□□□ -1.5
LRCH3-211ENST00000466054 AKAP10O43572 662 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 PHF2O75151 1096 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 ABLIM3O94929 683 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 WNT3AP56704 352 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 CPA6Q8N4T0 437 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 BOLLQ8N9W6 283 aaKnown RBP5.66□□□□□ -1.5
LRCH3-211ENST00000466054 GLB1L3Q8NCI6 653 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-211ENST00000466054 PIK3C3Q8NEB9 887 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 MYEOVQ96EZ4 313 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 KLHL42Q9P2K6 505 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 RNF7Q9UBF6 113 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 EID1Q9Y6B2 187 aa5.66□□□□□ -1.5
LRCH3-211ENST00000466054 LPXNO60711 386 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 TMEM127O75204 238 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 NDUFS2O75306 463 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 WASP42768 502 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms