RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 CLSTN2Q9H4D0 955 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 CHST7Q9NS84 486 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 MARCH5Q9NX47 278 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 CDH7Q9ULB5 785 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 HPSEQ9Y251 543 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
DDR1-242ENST00000465966 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
DDR1-242ENST00000465966 CACNA1AO00555 2505 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 SYCE3A1L190 88 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 ARL5CA6NH57 179 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 POTEMA6NI47 508 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 ASAP2O43150 1006 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 ZMYND10O75800 440 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 KRT37O76014 449 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 STBD1O95210 358 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 TDP2O95551 362 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 GLULP15104 373 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 CMA1P23946 247 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 HOXA11P31270 313 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 MLH1P40692 756 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 RFC5P40937 340 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 ATXN1P54253 815 aaKnown RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 ZNF445P59923 1031 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 GSE1Q14687 1217 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 MLF2Q15773 248 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 IL17AQ16552 155 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 SLC44A4Q53GD3 710 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 UBXN11Q5T124 520 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 NOTUMQ6P988 496 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 POTEGQ6S5H5 508 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 RSPO2Q6UXX9 243 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 ANO5Q75V66 913 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 POTEDQ86YR6 584 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 RNF168Q8IYW5 571 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 MAML2Q8IZL2 1156 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 PRPF31Q8WWY3 499 aaKnown RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 GJA10Q969M2 543 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 CCDC51Q96ER9 411 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 CEP170P1Q96L14 293 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 GAD1Q99259 594 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 NELL2Q99435 816 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 TRIM6Q9C030 488 aaPredicted RBP9.49□□□□□ -0.89
DDR1-242ENST00000465966 CSRNP2Q9H175 543 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 NUP62CLQ9H1M0 184 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 ZSCAN32Q9NX65 697 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 IPPQ9Y573 584 aa9.49□□□□□ -0.89
DDR1-242ENST00000465966 VWA3AA6NCI4 1184 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 SLC37A4O43826 429 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 TBC1D4O60343 1298 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 NEMFO60524 1076 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 XYLBO75191 536 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 TADA2AO75478 443 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 EFEMP2O95967 443 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 HNRNPA1P09651 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
DDR1-242ENST00000465966 OR52Z1P0C646 297 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 QARSP47897 775 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 SCNN1GP51170 649 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 DSC1Q08554 894 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 LAMTOR4Q0VGL1 99 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 ORC2Q13416 577 aaPredicted RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 ZBTB41Q5SVQ8 909 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 PLA2G4FQ68DD2 849 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 FUT10Q6P4F1 479 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 LILRA6Q6PI73 481 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 PARM1Q6UWI2 310 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 RBM43Q6ZSC3 357 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 USP49Q70CQ1 688 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 GRASPQ7Z6J2 395 aaPredicted RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 GLYCTKQ8IVS8 523 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 RNF149Q8NC42 400 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 SMG8Q8ND04 991 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 FGF14Q92915 247 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 TMEM143Q96AN5 459 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 RTKNQ9BST9 563 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 RPP25Q9BUL9 199 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 DDX23Q9BUQ8 820 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 GMEB2Q9UKD1 530 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 ADAM28Q9UKQ2 775 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 MRPS17Q9Y2R5 130 aaKnown RBP9.48□□□□□ -0.89
DDR1-242ENST00000465966 GIT1Q9Y2X7 761 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
DDR1-242ENST00000465966 DMDP11532 3685 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 CYP3A7-CYP3A51PA0A087WV96 503 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 LRRN2O75325 713 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
DDR1-242ENST00000465966 CYP3A7P24462 503 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 PRPHP41219 470 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 NPEPPSP55786 919 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 TFDP1Q14186 410 aa9.47□□□□□ -0.89
DDR1-242ENST00000465966 MXD4Q14582 209 aaPredicted RBP9.47□□□□□ -0.89
DDR1-242ENST00000465966 PPP2R5DQ14738 602 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms