RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 LAMTOR5O43504 91 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 KINO60870 393 aaKnown RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 DGAT1O75907 488 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 KRT37O76014 449 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 RECQL4O94761 1208 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 BAG4O95429 457 aaKnown RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 C1RP00736 705 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 LIG1P18858 919 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 TARSP26639 723 aaKnown RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 OR1D2P34982 312 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 TXKP42681 527 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 FOSBP53539 338 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 NAB2Q15742 525 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 EEF1DP3Q658K8 133 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 CPLX2Q6PUV4 134 aaKnown RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 NPAS3Q8IXF0 933 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 GPR65Q8IYL9 337 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 BCO2Q9BYV7 579 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 ANKEF1Q9NU02 776 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 PDRG1Q9NUG6 133 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 TPCN1Q9ULQ1 816 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 PCDHA12Q9UN75 941 aa11.42□□□□□ -0.58
GPNMB-206ENST00000465673 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
GPNMB-206ENST00000465673 TPRP12270 2363 aaKnown RBP11.41□□□□□ -0.58
GPNMB-206ENST00000465673 SHISA7A6NL88 538 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 REC8O95072 547 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 LYPLA2O95372 231 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 HNRNPA1P09651 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
GPNMB-206ENST00000465673 CREMQ03060 361 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 SLC5A9Q2M3M2 681 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 GLRA4Q5JXX5 417 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 CD300LGQ6UXG3 332 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 TPRG1Q6ZUI0 275 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 FAM177A1Q8N128 213 aaPredicted RBP11.41□□□□□ -0.58
GPNMB-206ENST00000465673 TNFRSF25Q93038 417 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 CCDC43Q96MW1 224 aaKnown RBP11.41□□□□□ -0.58
GPNMB-206ENST00000465673 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 FZD8Q9H461 694 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 PDZD7Q9H5P4 517 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 TTC12Q9H892 705 aaPredicted RBP11.41□□□□□ -0.58
GPNMB-206ENST00000465673 NCDNQ9UBB6 729 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 GDAQ9Y2T3 454 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
GPNMB-206ENST00000465673 EPG5Q9HCE0 2579 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 XYLBO75191 536 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 THP07101 528 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 SPATA31C1P0DKV0 1188 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 FDPSP14324 419 aaKnown RBP11.4□□□□□ -0.58
GPNMB-206ENST00000465673 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.58
GPNMB-206ENST00000465673 PRKCQQ04759 706 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 FZD5Q13467 585 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 RAB33AQ14088 237 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 CALCRLQ16602 461 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 PABPC1LQ4VXU2 614 aaKnown RBP11.4□□□□□ -0.58
GPNMB-206ENST00000465673 TANGO2Q6ICL3 276 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 MTSS1LQ765P7 747 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 NECAB1Q8N987 351 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 ATRIPQ8WXE1 791 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 GOLGA2P5Q9HBQ8 144 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 HEBP1Q9NRV9 189 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.58
GPNMB-206ENST00000465673 FBXO4Q9UKT5 387 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 MRPS23Q9Y3D9 190 aaKnown RBP11.4□□□□□ -0.58
GPNMB-206ENST00000465673 CDY1Q9Y6F8 540 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
GPNMB-206ENST00000465673 STK36Q9NRP7 1315 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 DCDC2BA2VCK2 349 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 BTBD18B2RXH4 712 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 PFKFB2O60825 505 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 MED24O75448 989 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 B3GAT3O94766 335 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 RHOP08100 348 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 CEBPBP17676 345 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 XBP1P17861 261 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 FGFR3P22607 806 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 TKTP29401 623 aaKnown RBP11.39□□□□□ -0.59
GPNMB-206ENST00000465673 HOXA9P31269 272 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 KRT2P35908 639 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 BRCC3P46736 316 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 CLCNKBP51801 687 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 LPAL2Q16609 132 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 ZNF528Q3MIS6 628 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 ZBTB41Q5SVQ8 909 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
GPNMB-206ENST00000465673 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
GPNMB-206ENST00000465673 ZBTB44Q8NCP5 570 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms