RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PITRM1Q5JRX3 1037 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 CC2D1BQ5T0F9 858 aaKnown RBP4.04□□□□□ -1.76
SNX4-202ENST00000465505 ZKSCAN2Q63HK3 967 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 RASSF3Q86WH2 238 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 NBPF5PQ86XG9 351 aaPredicted RBP4.04□□□□□ -1.76
SNX4-202ENST00000465505 OR2W6PQ8NHA6 318 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 CDC5LQ99459 802 aaKnown RBP4.04□□□□□ -1.76
SNX4-202ENST00000465505 YY1AP1Q9H869 796 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 KLHL42Q9P2K6 505 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 FRMD4BQ9Y2L6 1034 aa4.04□□□□□ -1.76
SNX4-202ENST00000465505 EPN1Q9Y6I3 576 aaPredicted RBP4.04□□□□□ -1.76
SNX4-202ENST00000465505 B5MCH6 92 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 KIAA0355O15063 1070 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 KDM1AO60341 852 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 PRAMEF4O60810 478 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 ITGA10O75578 1167 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 GASTP01350 101 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 LPLP06858 475 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 RBP3P10745 1247 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 CTSSP25774 331 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 USP14P54578 494 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 IL2P60568 153 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 SLC20A2Q08357 652 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 PDCD1Q15116 288 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 ZKSCAN8Q15776 578 aaPredicted RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 DDB1Q16531 1140 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 PDCD4Q53EL6 469 aaKnown RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 CT83Q5H943 113 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 FAM102AQ5T9C2 384 aaPredicted RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 EGFLAMQ63HQ2 1017 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 EFCAB12Q6NXP0 572 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 C11orf74Q86VG3 221 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 PLXDC1Q8IUK5 500 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 OR10H5Q8NGA6 315 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 MDM1Q8TC05 714 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 LINC00476Q8WZB0 136 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 SLC5A5Q92911 643 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 CEP95Q96GE4 821 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 ZNF764Q96H86 408 aaPredicted RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 BBC3Q96PG8 261 aaPredicted RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 GPRC5DQ9NZD1 345 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 RAI14Q9P0K7 980 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 ABCF2Q9UG63 623 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 NRBP1Q9UHY1 535 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 NOC2LQ9Y3T9 749 aaKnown RBP4.03□□□□□ -1.76
SNX4-202ENST00000465505 CDY2AQ9Y6F7 541 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 UNC13AQ9UPW8 1703 aa4.03□□□□□ -1.76
SNX4-202ENST00000465505 A0A087X0B3 334 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 BICDL2A1A5D9 508 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 PIPSLA2A3N6 862 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 GSG1L2A8MUP6 293 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 DHX16O60231 1041 aaKnown RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 ZNF500O60304 480 aaPredicted RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 MGAT1P26572 445 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 LGALS4P56470 323 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 POU5F1Q01860 360 aaKnown RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 MFSD14BQ5SR56 506 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 GJC2Q5T442 439 aaPredicted RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 ADGRG3Q86Y34 549 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 CMTR2Q8IYT2 770 aaKnown RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 LCORLQ8N3X6 602 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 CPEB3Q8NE35 698 aaKnown RBP4.02□□□□□ -1.77
SNX4-202ENST00000465505 SUPT20HQ8NEM7 779 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 MFSD3Q96ES6 412 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 COQ10AQ96MF6 247 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 FEZ1Q99689 392 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 ADAM2Q99965 735 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 KCTD10Q9H3F6 313 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 POGKQ9P215 609 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 PTGFRNQ9P2B2 879 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 PLAAQ9Y263 795 aa4.02□□□□□ -1.77
SNX4-202ENST00000465505 DRGXA6NNA5 263 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 MARCH11A6NNE9 402 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 CDC45O75419 566 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 VDRP11473 427 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 PEX19P40855 299 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 IL12RB1P42701 662 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 SEC24CP53992 1094 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 IGBP1P78318 339 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 GUCY1B3Q02153 619 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 MAP2K1Q02750 393 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 FOXI1Q12951 378 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 HNRNPA0Q13151 305 aaKnown RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 CDC37Q16543 378 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 HSP90AB2PQ58FF8 381 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 FAM47AQ5JRC9 791 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 STRIP1Q5VSL9 837 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 ICE2Q659A1 982 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 GET4Q7L5D6 327 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 KIAA0907Q7Z7F0 614 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 C11orf96Q7Z7L8 435 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 RNF169Q8NCN4 708 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 SLC35B2Q8TB61 432 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 LEO1Q8WVC0 666 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 TFAP2CQ92754 450 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 EAF2Q96CJ1 260 aaPredicted RBP4.01□□□□□ -1.77
SNX4-202ENST00000465505 NEU1Q99519 415 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 PRDM13Q9H4Q3 707 aa4.01□□□□□ -1.77
SNX4-202ENST00000465505 CHPF2Q9P2E5 772 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms