RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-225	ENST00000465158	FAM187B	Q17R55	369 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	EML3	Q32P44	896 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	C4orf17	Q53FE4	359 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	TCP11X2	Q5H9J9	407 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	FKBP15	Q5T1M5	1219 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	CDKAL1	Q5VV42	579 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	ANKRD40	Q6AI12	368 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	TRMT1L	Q7Z2T5	733 aa	Known RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	CTU1	Q7Z7A3	348 aa	Known RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	RPAIN	Q86UA6	219 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	MAP4K3	Q8IVH8	894 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	DAW1	Q8N136	415 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158		Q8N3U1	123 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	DNAJC5G	Q8N7S2	189 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	TMEM161B	Q8NDZ6	487 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	KLHDC9	Q8NEP7	349 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	RHBDD1	Q8TEB9	315 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	PRPF31	Q8WWY3	499 aa	Known RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	CEP89	Q96ST8	783 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	MRPL4	Q9BYD3	311 aa	Known RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	GCOM2	Q9BZD3	368 aa	Predicted RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	KCTD10	Q9H3F6	313 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	RNPEP	Q9H4A4	650 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	PRMT7	Q9NVM4	692 aa	Predicted RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	ARHGAP28	Q9P2N2	729 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	LIMA1	Q9UHB6	759 aa	Known RBP	7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	PHF24	Q9UPV7	400 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	MAPK8IP1	Q9UQF2	711 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	NOD1	Q9Y239	953 aa		7.31	□□□□□ -1.24
RBM39-225	ENST00000465158	MROH7	Q68CQ1	1323 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158		A0A087WWV3	80 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	SFI1	A8K8P3	1242 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ZBTB42	B2RXF5	422 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	KCNJ18	B7U540	433 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ACKR2	O00590	384 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	HNRNPDL	O14979	420 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	SLC16A4	O15374	487 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	N4BP1	O75113	896 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ADAMTS4	O75173	837 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	PIGR	P01833	764 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	NR3C1	P04150	777 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ASGR1	P07306	291 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ZNF286B	P0CG31	522 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ELN	P15502	786 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	GLRA2	P23416	452 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	NR2F2	P24468	414 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	NMT1	P30419	496 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	MTIF2	P46199	727 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	LIG4	P49917	911 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	AP3M2	P53677	418 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	STX17	P56962	302 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	GSDMD	P57764	484 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	FANCC	Q00597	558 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	NCOA4	Q13772	614 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	KCNJ12	Q14500	433 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	KCNA10	Q16322	511 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	MAN2A1	Q16706	1144 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	CCDC40	Q4G0X9	1142 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ZCWPW2	Q504Y3	356 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	HS1BP3	Q53T59	392 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	GJC2	Q5T442	439 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	INTS8	Q75QN2	995 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	MAEA	Q7L5Y9	396 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	RHPN2	Q8IUC4	686 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	DRC7	Q8IY82	874 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	USP38	Q8NB14	1042 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	XXYLT1	Q8NBI6	393 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	TRPV1	Q8NER1	839 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	VTI1A	Q96AJ9	217 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	TRIM44	Q96DX7	344 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	BICD1	Q96G01	975 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	SCLT1	Q96NL6	688 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	TSPAN18	Q96SJ8	248 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	FIZ1	Q96SL8	496 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ADPGK	Q9BRR6	497 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	NUP58	Q9BVL2	599 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	7.3	□□□□□ -1.24	1e-15	■□□□□ 10.2
RBM39-225	ENST00000465158	SEMA6B	Q9H3T3	888 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	XPNPEP1	Q9NQW7	623 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	ARMCX3	Q9UH62	379 aa	Predicted RBP	7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	AKT3	Q9Y243	479 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	7.3	□□□□□ -1.24	1e-10	■□□□□ 9.1
RBM39-225	ENST00000465158	SQOR	Q9Y6N5	450 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158	CIT	O14578	2027 aa		7.3	□□□□□ -1.24
RBM39-225	ENST00000465158		A0A0U1RQG5	324 aa	Predicted RBP	7.29	□□□□□ -1.24
RBM39-225	ENST00000465158		A0A1W2PQC6	194 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	DNM1L	O00429	736 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	N4BP3	O15049	544 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	P4HA2	O15460	535 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	CLDN3	O15551	220 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	EXOC3	O60645	756 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	TOM1L1	O75674	476 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	ERLIN2	O94905	339 aa		7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	PRPF6	O94906	941 aa	Known RBP	7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	PARN	O95453	639 aa	Known RBP	7.29	□□□□□ -1.24
RBM39-225	ENST00000465158	ADCY5	O95622	1261 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms