RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 EDN1P05305 212 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 PTGIRP43119 386 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 ZBTB41Q5SVQ8 909 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 SCARA3Q6AZY7 606 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 LRIG3Q6UXM1 1119 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 C15orf39Q6ZRI6 1047 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 ZDHHC18Q9NUE0 388 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 GTF3C4Q9UKN8 822 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 ATP8A1Q9Y2Q0 1164 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 AFG3L2Q9Y4W6 797 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 SIP14410 1827 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 SPOPO43791 374 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 ZEB2O60315 1214 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 PHF2O75151 1096 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 HPDP32754 393 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 LIG4P49917 911 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 POLGP54098 1239 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 HIRAP54198 1017 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 IRX5P78411 483 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 MIS18BP1Q6P0N0 1132 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 SEPT14Q6ZU15 432 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 FMO2Q99518 471 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 RAB17Q9H0T7 212 aa20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 CNOT8Q9UFF9 292 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-210ENST00000464987 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 CTNNA2P26232 953 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 GTF2H1P32780 548 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 RTP1P59025 263 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 MKRN4PQ13434 485 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 GNPTABQ3T906 1256 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 XKR3Q5GH77 459 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 TDRD10Q5VZ19 366 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 ACAD10Q6JQN1 1059 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 MAGOHBQ96A72 148 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 CDHR1Q96JP9 859 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 WNT8AQ9H1J5 351 aa20.05■□□□□ 0.8
TSPAN4-210ENST00000464987 HMGB1P1B2RPK0 211 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 KIAA0391O15091 583 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 MYZAPP0CAP1 466 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 TNNI1P19237 187 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 GLRA2P23416 452 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 SSTR3P32745 418 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 TREML2Q5T2D2 321 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 UBAP2Q5T6F2 1119 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 ZDHHC24Q6UX98 284 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 CRELD2Q6UXH1 353 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 APOBEC3FQ8IUX4 373 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 C10orf67Q8IYJ2 551 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 TXLNGYQ9BZA5 131 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 EXTL3O43909 919 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 CFHP08603 1231 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 PLTPP55058 493 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 GCNT1Q02742 428 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 CLEC16AQ2KHT3 1053 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 SEL1L2Q5TEA6 688 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 FBXO25Q8TCJ0 367 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 CPA5Q8WXQ8 436 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 ZNF302Q9NR11 478 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 BCCIPQ9P287 314 aaKnown RBP eCLIP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 MAFBQ9Y5Q3 323 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 PCNTO95613 3336 aa20.04■□□□□ 0.8
TSPAN4-210ENST00000464987 LRRIQ4A6NIV6 560 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 DCDC2CA8MYV0 355 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 UNGP13051 313 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 KCNJ1P48048 391 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 DHX34Q14147 1143 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 SIX1Q15475 284 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 DAB2IPQ5VWQ8 1189 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 CCDC137Q6PK04 289 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 C1orf131Q8NDD1 294 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 EPB41L4BQ9H329 900 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 GRHL1Q9NZI5 618 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 PCDHA3Q9Y5H8 950 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 GOLGA6L10A6NI86 522 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 VNN1O95497 513 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 HLA-DRAP01903 254 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 C4BPAP04003 597 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 LSP1P33241 339 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 RPL21P46778 160 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 STXBP2Q15833 593 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 ZACNQ401N2 412 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 EMC10Q5UCC4 262 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 USP37Q86T82 979 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 SLC13A5Q86YT5 568 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 C1orf112Q9NSG2 853 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 AGO2Q9UKV8 859 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 MYPNQ86TC9 1320 aa20.03■□□□□ 0.8
TSPAN4-210ENST00000464987 FAM187AA6NFU0 413 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 PPFIA2O75334 1257 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 ATG7O95352 703 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 OATP04181 439 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 RARAP10276 462 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 FNBP1Q96RU3 617 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 CEP89Q96ST8 783 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 TARS2Q9BW92 718 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms