RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GLYCTKQ8IVS8 523 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 NTPCRQ9BSD7 190 aaKnown RBP28.37■■■□□ 2.13
U2AF1-206ENST00000464750 TOPORSQ9NS56 1045 aaPredicted RBP28.37■■■□□ 2.13
U2AF1-206ENST00000464750 FNIP2Q9P278 1114 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 DPP7Q9UHL4 492 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 PDCD11Q14690 1871 aaKnown RBP28.37■■■□□ 2.13
U2AF1-206ENST00000464750 ZNF318Q5VUA4 2279 aa28.37■■■□□ 2.13
U2AF1-206ENST00000464750 TMEM221A6NGB7 291 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 M0R296 226 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 MYBP10242 640 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 MCF2P10911 925 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 HARSP12081 509 aaKnown RBP28.36■■■□□ 2.13
U2AF1-206ENST00000464750 RPL17P18621 184 aaKnown RBP28.36■■■□□ 2.13
U2AF1-206ENST00000464750 PROZP22891 400 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 STRN3Q13033 797 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 PRSS55Q6UWB4 352 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-206ENST00000464750 MPZL3Q6UWV2 235 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 C15orf39Q6ZRI6 1047 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 CCDC149Q6ZUS6 474 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 PALB2Q86YC2 1186 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 TMEM161BQ8NDZ6 487 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 CMASQ8NFW8 434 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-206ENST00000464750 RASSF8Q8NHQ8 419 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 LRRC15Q8TF66 581 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 TCHPQ9BT92 498 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 TTPALQ9BTX7 342 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 KCNG1Q9UIX4 513 aa28.36■■■□□ 2.13
U2AF1-206ENST00000464750 ABLIM1O14639 778 aa28.35■■■□□ 2.13
U2AF1-206ENST00000464750 MAPTP10636 758 aaKnown RBP28.35■■■□□ 2.13
U2AF1-206ENST00000464750 KARSQ15046 597 aaKnown RBP28.35■■■□□ 2.13
U2AF1-206ENST00000464750 ARSHQ5FYA8 562 aa28.35■■■□□ 2.13
U2AF1-206ENST00000464750 FAM171A1Q5VUB5 890 aa28.35■■■□□ 2.13
U2AF1-206ENST00000464750 GPBP1Q86WP2 473 aa28.35■■■□□ 2.13
U2AF1-206ENST00000464750 USTQ9Y2C2 406 aa28.35■■■□□ 2.13
U2AF1-206ENST00000464750 ARIH1Q9Y4X5 557 aaPredicted RBP28.35■■■□□ 2.13
U2AF1-206ENST00000464750 SPATA31D3P0C874 917 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 PLCG1P19174 1290 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 PLA2G5P39877 138 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 SIGLEC14Q08ET2 396 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 ELAVL2Q12926 359 aaKnown RBP28.34■■■□□ 2.13
U2AF1-206ENST00000464750 DHX8Q14562 1220 aaKnown RBP28.34■■■□□ 2.13
U2AF1-206ENST00000464750 SPATA31D4Q6ZUB0 917 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 CEP57Q86XR8 500 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 PIK3R5Q8WYR1 880 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 SNX27Q96L92 541 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 REEP2Q9BRK0 252 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 GOLGA2P5Q9HBQ8 144 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 BLOC1S4Q9NUP1 217 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 LARSQ9P2J5 1176 aaKnown RBP28.34■■■□□ 2.13
U2AF1-206ENST00000464750 ANKFY1Q9P2R3 1169 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 ODF2LQ9ULJ1 636 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 CLIC4Q9Y696 253 aa28.34■■■□□ 2.13
U2AF1-206ENST00000464750 SMIM28A0A1B0GU29 152 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 TMEM189-UBE2V1I3L0A0 370 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 TGM5O43548 720 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 BRD1O95696 1058 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 SYT1P21579 422 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 CLCNKBP51801 687 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 RESTQ13127 1097 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 PSMD5Q16401 504 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 ZDHHC14Q8IZN3 488 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 HDAC7Q8WUI4 952 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 FAM122AQ96E09 287 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 INTS4Q96HW7 963 aaKnown RBP28.33■■■□□ 2.13
U2AF1-206ENST00000464750 ZBTB45Q96K62 511 aaPredicted RBP28.33■■■□□ 2.13
U2AF1-206ENST00000464750 MFSD14AQ96MC6 490 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 UROC1Q96N76 676 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 MUC6Q6W4X9 2439 aa28.33■■■□□ 2.13
U2AF1-206ENST00000464750 CCDC195A0A1B0GUA6 201 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 TOM1L1O75674 476 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 RFPL2O75678 378 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 B3GAT3O94766 335 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 C1RP00736 705 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 NCKAP1LP55160 1127 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 NOLC1Q14978 699 aaKnown RBP eCLIP28.32■■■□□ 2.12
U2AF1-206ENST00000464750 XKR4Q5GH76 650 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 ZPBP2Q6X784 338 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.32■■■□□ 2.12
U2AF1-206ENST00000464750 KREMEN2Q8NCW0 462 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 RAD54LQ92698 747 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 ACAP3Q96P50 834 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 PLEKHA4Q9H4M7 779 aa28.32■■■□□ 2.12
U2AF1-206ENST00000464750 H0YCG3 227 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 SOX4Q06945 474 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-206ENST00000464750 MCM6Q14566 821 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 PTPAQ15257 358 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 DCLRE1AQ6PJP8 1040 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 ALKAL1Q6UXT8 129 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 BMP8AQ7Z5Y6 402 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 PLCD3Q8N3E9 789 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 LNX1Q8TBB1 728 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-206ENST00000464750 ACSF2Q96CM8 615 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-206ENST00000464750 FOXD4L1Q9NU39 408 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 SORCS3Q9UPU3 1222 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 MYH15Q9Y2K3 1946 aa28.31■■■□□ 2.12
U2AF1-206ENST00000464750 K7ELQ4 463 aaPredicted RBP28.3■■■□□ 2.12
U2AF1-206ENST00000464750 FAM13AO94988 1023 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 IGFBP6P24592 240 aaPredicted RBP28.3■■■□□ 2.12
U2AF1-206ENST00000464750 MTMR3Q13615 1198 aa28.3■■■□□ 2.12
U2AF1-206ENST00000464750 UPP1Q16831 310 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms