RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 ADSSL1Q8N142 457 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 BHMT2Q9H2M3 363 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
RPA3-206ENST00000463632 PROB1E7EW31 1015 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 PTGESO14684 152 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 EFEMP2O95967 443 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 DCNP07585 359 aaKnown RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 HARSP12081 509 aaKnown RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 OR1D2P34982 312 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 ARPP19P56211 112 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 LNX1Q8TBB1 728 aaPredicted RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 SLC7A14Q8TBB6 771 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 PIK3R5Q8WYR1 880 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 CLSTN3Q9BQT9 956 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 ARHGEF3Q9NR81 526 aa13.56□□□□□ -0.24
RPA3-206ENST00000463632 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
RPA3-206ENST00000463632 TRIOO75962 3097 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 ADAM12O43184 909 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 TRAPPC3O43617 180 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 C1RP00736 705 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 HNRNPA1P09651 372 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPA3-206ENST00000463632 ELF1P32519 619 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
RPA3-206ENST00000463632 ST3GAL1Q11201 340 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 ORC2Q13416 577 aaPredicted RBP13.55□□□□□ -0.24
RPA3-206ENST00000463632 NBR1Q14596 966 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
RPA3-206ENST00000463632 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
RPA3-206ENST00000463632 SHDQ96IW2 340 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 CXCL16Q9H2A7 254 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 FBXW11Q9UKB1 542 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 SIT1Q9Y3P8 196 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
RPA3-206ENST00000463632 I3L4J1 428 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 CLCNKBP51801 687 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 PEX3P56589 373 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 GPC5P78333 572 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 HTR4Q13639 388 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 PARM1Q6UWI2 310 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 MTSS1LQ765P7 747 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 ING5Q8WYH8 240 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 LLPHQ9BRT6 129 aaKnown RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 RPP25Q9BUL9 199 aaKnown RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 CCDC113Q9H0I3 377 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 GOLGA2P5Q9HBQ8 144 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 MRPS23Q9Y3D9 190 aaKnown RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 ZFP37Q9Y6Q3 630 aaPredicted RBP13.54□□□□□ -0.24
RPA3-206ENST00000463632 R4GN57 208 aa13.54□□□□□ -0.24
RPA3-206ENST00000463632 PRRG1O14668 218 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 SEC24BO95487 1268 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 MUTP22033 750 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
RPA3-206ENST00000463632 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPA3-206ENST00000463632 BRCC3P46736 316 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 SNW1Q13573 536 aaKnown RBP13.53□□□□□ -0.24
RPA3-206ENST00000463632 UBXN2BQ14CS0 331 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 ECM1Q16610 540 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 PABPC1LQ4VXU2 614 aaKnown RBP13.53□□□□□ -0.24
RPA3-206ENST00000463632 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 FBXO18Q8NFZ0 1043 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 ITFG1Q8TB96 612 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 FGF13Q92913 245 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 FGF14Q92915 247 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 UROC1Q96N76 676 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 MRPL4Q9BYD3 311 aaKnown RBP13.53□□□□□ -0.24
RPA3-206ENST00000463632 FOXQ1Q9C009 403 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
RPA3-206ENST00000463632 ZFHX2Q9C0A1 2572 aaPredicted RBP13.53□□□□□ -0.24
RPA3-206ENST00000463632 ANHXE9PGG2 379 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 HIP1RO75146 1068 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 LRG1P02750 347 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 EDN1P05305 212 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
RPA3-206ENST00000463632 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms