RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CDH7Q9ULB5 785 aa12.37□□□□□ -0.43
SSR3-202ENST00000463503 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
SSR3-202ENST00000463503 SAMM50Q9Y512 469 aa12.37□□□□□ -0.43
SSR3-202ENST00000463503 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
SSR3-202ENST00000463503 ZMYND10O75800 440 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 FSHRP23945 695 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 PMLP29590 882 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 PRPHP41219 470 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 NTHL1P78549 312 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 MTAPQ13126 283 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
SSR3-202ENST00000463503 KSR1Q8IVT5 923 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 ZNF687Q8N1G0 1237 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 FGF13Q92913 245 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 PGBD4Q96DM1 585 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 FAM20AQ96MK3 541 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
SSR3-202ENST00000463503 FAM126AQ9BYI3 521 aaPredicted RBP12.36□□□□□ -0.43
SSR3-202ENST00000463503 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
SSR3-202ENST00000463503 DDX25Q9UHL0 483 aaKnown RBP12.36□□□□□ -0.43
SSR3-202ENST00000463503 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 WNT7AO00755 349 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 TDP2O95551 362 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 YEATS4O95619 227 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 ATP2C1P98194 919 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 LPAL2Q16609 132 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 PRR16Q569H4 304 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 ARL6IP4Q66PJ3 421 aaKnown RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 TPRG1Q6ZUI0 275 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 MTSS1LQ765P7 747 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 GRASPQ7Z6J2 395 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 RHPN2Q8IUC4 686 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 SLFN12Q8IYM2 578 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 SMG8Q8ND04 991 aaKnown RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 NLRP4Q96MN2 994 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 FAM193BQ96PV7 902 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 RIT2Q99578 217 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 KXD1Q9BQD3 176 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 SH2D3AQ9BRG2 576 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 FNIP2Q9P278 1114 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
SSR3-202ENST00000463503 TCEAL9Q9UHQ7 104 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 FBXW11Q9UKB1 542 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 PCDHB6Q9Y5E3 794 aa12.35□□□□□ -0.43
SSR3-202ENST00000463503 MSH4O15457 936 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 SLC37A4O43826 429 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 GAS2O43903 313 aaKnown RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 GDF9O60383 454 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 NEMFO60524 1076 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 LRP3O75074 770 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 OR1G1P47890 313 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 SHC2P98077 582 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 PFKPQ01813 784 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 PTPAQ15257 358 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 ZBTB41Q5SVQ8 909 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 PRR23CQ6ZRP0 262 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 GPR65Q8IYL9 337 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 HAS1Q92839 578 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 SLC5A5Q92911 643 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 INO80BQ9C086 356 aaPredicted RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
SSR3-202ENST00000463503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.34□□□□□ -0.43
SSR3-202ENST00000463503 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
SSR3-202ENST00000463503 ARL5CA6NH57 179 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 CHMP2AO43633 222 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 MAFO75444 373 aaPredicted RBP12.33□□□□□ -0.44
SSR3-202ENST00000463503 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
SSR3-202ENST00000463503 RETP07949 1114 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 MCM7P33993 719 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 MLH1P40692 756 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 KRT85P78386 507 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 SLC39A14Q15043 492 aa12.33□□□□□ -0.44
SSR3-202ENST00000463503 SF3A1Q15459 793 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms