RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SLC7A14Q8TBB6 771 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 PIK3R5Q8WYR1 880 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 TTPALQ9BTX7 342 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 NFKBIZQ9BYH8 718 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 SPATA6Q9NWH7 488 aaPredicted RBP17.38■□□□□ 0.37
SND1-203ENST00000463020 SNTG2Q9NY99 539 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
SND1-203ENST00000463020 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 MIA3Q5JRA6 1907 aa17.38■□□□□ 0.37
SND1-203ENST00000463020 SF3B1O75533 1304 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■■■■ 43.1
SND1-203ENST00000463020 DGAT1O75907 488 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 FDPSP14324 419 aaKnown RBP17.37■□□□□ 0.37
SND1-203ENST00000463020 UBXN2BQ14CS0 331 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 SLC5A9Q2M3M2 681 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 PPM1LQ5SGD2 360 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 EEF1DP3Q658K8 133 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 NPAS3Q8IXF0 933 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
SND1-203ENST00000463020 POLIQ9UNA4 740 aa17.37■□□□□ 0.37
SND1-203ENST00000463020 LRRIQ4A6NIV6 560 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 FAM170BA6NMN3 283 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 MARCH6O60337 910 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 RECQL4O94761 1208 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 TARSP26639 723 aaKnown RBP17.36■□□□□ 0.37
SND1-203ENST00000463020 CSTF1Q05048 431 aaKnown RBP17.36■□□□□ 0.37
SND1-203ENST00000463020 FZD5Q13467 585 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 PUM1Q14671 1186 aaKnown RBP eCLIP17.36■□□□□ 0.37
SND1-203ENST00000463020 CDCA2Q69YH5 1023 aaPredicted RBP17.36■□□□□ 0.37
SND1-203ENST00000463020 ZC3H14Q6PJT7 736 aaKnown RBP17.36■□□□□ 0.37
SND1-203ENST00000463020 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 LTB4R2Q9NPC1 389 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 ANKEF1Q9NU02 776 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 PDRG1Q9NUG6 133 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 STK36Q9NRP7 1315 aa17.36■□□□□ 0.37
SND1-203ENST00000463020 I3L4J1 428 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 KRT37O76014 449 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 HNRNPA1P09651 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
SND1-203ENST00000463020 OR1D2P34982 312 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 CREMQ03060 361 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 NCBP1Q09161 790 aaKnown RBP17.35■□□□□ 0.37
SND1-203ENST00000463020 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 AXDND1Q5T1B0 1012 aaPredicted RBP17.35■□□□□ 0.37
SND1-203ENST00000463020 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 C3orf58Q8NDZ4 430 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 CNTNAP3BQ96NU0 1288 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 CNTNAP3Q9BZ76 1288 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 TMEM60Q9H2L4 133 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 FZD8Q9H461 694 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
SND1-203ENST00000463020 GOLGA2P5Q9HBQ8 144 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 ZFP37Q9Y6Q3 630 aaPredicted RBP17.35■□□□□ 0.37
SND1-203ENST00000463020 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
SND1-203ENST00000463020 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
SND1-203ENST00000463020 REC8O95072 547 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 LARGE1O95461 756 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 TXKP42681 527 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 FOSBP53539 338 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 HACE1Q8IYU2 909 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 MTMR9Q96QG7 549 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 PCDHA12Q9UN75 941 aa17.34■□□□□ 0.37
SND1-203ENST00000463020 CACNA1BQ00975 2339 aa17.33■□□□□ 0.37
SND1-203ENST00000463020 LAMTOR5O43504 91 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 PFKFB2O60825 505 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 MED24O75448 989 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 CEBPBP17676 345 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 FGFR3P22607 806 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 TGM1P22735 817 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 FCARP24071 287 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 TKTP29401 623 aaKnown RBP17.33■□□□□ 0.36
SND1-203ENST00000463020 HOXA9P31269 272 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 RAB33AQ14088 237 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 CALCRLQ16602 461 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 ZNF528Q3MIS6 628 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
SND1-203ENST00000463020 VARS2Q5ST30 1063 aaKnown RBP17.33■□□□□ 0.36
SND1-203ENST00000463020 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
SND1-203ENST00000463020 TPRG1Q6ZUI0 275 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 MTSS1LQ765P7 747 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 ZNF687Q8N1G0 1237 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 NELL1Q92832 810 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 MCRS1Q96EZ8 462 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 SHDQ96IW2 340 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 BCO2Q9BYV7 579 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 PARD6AQ9NPB6 346 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 HEBP1Q9NRV9 189 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 MTRRQ9UBK8 725 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 GDAQ9Y2T3 454 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 TPRP12270 2363 aaKnown RBP17.33■□□□□ 0.36
SND1-203ENST00000463020 COL4A2P08572 1712 aa17.33■□□□□ 0.36
SND1-203ENST00000463020 ACACBO00763 2458 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 NCANO14594 1321 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms