RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KREMEN1Q96MU8 473 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CTAGE15A4D2H0 777 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 TTLL13PA6NNM8 815 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 BTNL10A8MVZ5 291 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 MSCO60682 206 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 H2AFZP0C0S5 128 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CTAGE8P0CG41 777 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 TNFAIP3P21580 790 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 IRX5P78411 483 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-213ENST00000462730 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 PPFIA1Q13136 1202 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 TFDP1Q14186 410 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CC2D1AQ6P1N0 951 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-213ENST00000462730 ZPBP2Q6X784 338 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 H2AFVQ71UI9 128 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CTAGE6Q86UF2 777 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CTAGE4Q8IX94 777 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 ZNF516Q92618 1163 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 ZNF668Q96K58 619 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-213ENST00000462730 CAPZA3Q96KX2 299 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 EPC1Q9H2F5 836 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 PDE11AQ9HCR9 933 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 SEPT11Q9NVA2 429 aaKnown RBP15.62■□□□□ 0.09
HDAC6-213ENST00000462730 SNX12Q9UMY4 172 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 GABRQQ9UN88 632 aa15.62■□□□□ 0.09
HDAC6-213ENST00000462730 ERICH4A6NGS2 130 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 NCK2O43639 380 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 PALMO75781 387 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 TNNI1P19237 187 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 MAPK6Q16659 721 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 C15orf39Q6ZRI6 1047 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 ZBTB33Q86T24 672 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 SLC20A1Q8WUM9 679 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 RABGGTAQ92696 567 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 ELMO3Q96BJ8 720 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 AGPAT1Q99943 283 aa15.61■□□□□ 0.09
HDAC6-213ENST00000462730 CASP8AP2Q9UKL3 1982 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 MAGEB2O15479 319 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CLDN3O15551 220 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TBC1D8O95759 1140 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 F2P00734 622 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 FLT3LGP49771 235 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CLDN10P78369 228 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 PRKCZQ05513 592 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
HDAC6-213ENST00000462730 GRIK4Q16099 956 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 SEZ6Q53EL9 994 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 LINC01465Q8N7H1 131 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CAGE1Q8TC20 777 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TRIB2Q92519 343 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CGRRF1Q99675 332 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 ACO2Q99798 780 aaKnown RBP15.6■□□□□ 0.09
HDAC6-213ENST00000462730 PI4K2AQ9BTU6 479 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 UBXN6Q9BZV1 441 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 INTUQ9ULD6 942 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 HYOU1Q9Y4L1 999 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 PTPRJQ12913 1337 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TMCO5BA8MYB1 307 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 ZNF185O15231 689 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TOM1L1O75674 476 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 HLA-DRAP01903 254 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 AKR1A1P14550 325 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 APLP1P51693 650 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 CAP1Q01518 475 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TDRD10Q5VZ19 366 aaKnown RBP15.6■□□□□ 0.09
HDAC6-213ENST00000462730 NFRKBQ6P4R8 1299 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 MTHFD1LQ6UB35 978 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 FAM71AQ8IYT1 594 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 SHC3Q92529 594 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TATDN2Q93075 761 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 TCHPQ9BT92 498 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 PCDHGC5Q9Y5F6 944 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 MYH10P35580 1976 aa15.6■□□□□ 0.09
HDAC6-213ENST00000462730 GRID2IPA4D2P6 1211 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 INO80B-WBP1J3KQ70 363 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 ASAP2O43150 1006 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 SASH3O75995 380 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 SGPL1O95470 568 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 FTCDO95954 541 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 C4BPAP04003 597 aaKnown RBP15.59■□□□□ 0.09
HDAC6-213ENST00000462730 PIK3CAP42336 1068 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 NOP2P46087 812 aaKnown RBP15.59■□□□□ 0.09
HDAC6-213ENST00000462730 CPT1AP50416 773 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 GALCP54803 685 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 BIRC3Q13489 604 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 ZACNQ401N2 412 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 REM2Q8IYK8 340 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-213ENST00000462730 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 MMS19Q96T76 1030 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 INO80BQ9C086 356 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-213ENST00000462730 C1orf112Q9NSG2 853 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 AKT3Q9Y243 479 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 CNTNAP2Q9UHC6 1331 aa15.59■□□□□ 0.09
HDAC6-213ENST00000462730 ZC3H11AO75152 810 aaKnown RBP eCLIP15.58■□□□□ 0.09
HDAC6-213ENST00000462730 CYBAP13498 195 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 PTENP60484 403 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 BEX3Q00994 111 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms