RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 GHRP10912 638 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ENDOUP21128 410 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 ATP6V1C1P21283 382 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 EPHB4P54760 987 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ATP11AP98196 1134 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 MYL5Q02045 173 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 SEPT7Q16181 437 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SH2D4BQ5SQS7 431 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 EMC10Q5UCC4 262 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 CYP26C1Q6V0L0 522 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SH3RF1Q7Z6J0 888 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 NDEL1Q9GZM8 345 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 DRC3Q9H069 523 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 RNF41Q9H4P4 317 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 TUT1Q9H6E5 874 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 GPHNQ9NQX3 736 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 NKX1-2Q9UD57 310 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 SLC4A4Q9Y6R1 1079 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ZNF536O15090 1300 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 GOLGA6L10A0A0M3HER8 536 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SMIM23A6NLE4 172 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 H0Y3Z8 333 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 HGSO14964 777 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 ATP1A1P05023 1023 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 KRT16P08779 473 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 KCNA2P16389 499 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 NLRP12P59046 1061 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 NLRP5P59047 1200 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 RESTQ13127 1097 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ITGB3BPQ13352 177 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ODR4Q5SWX8 454 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 FAM83BQ5T0W9 1011 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 BHMTQ93088 406 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ATP6V1G3Q96LB4 118 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 CDCA3Q99618 268 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 RHOBTB2Q9BYZ6 727 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 CCDC8Q9H0W5 538 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 PRDM5Q9NQX1 630 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 RNF146Q9NTX7 359 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 CYP39A1Q9NYL5 469 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SLC12A4Q9UP95 1085 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ASTN1O14525 1302 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SOWAHBA6NEL2 793 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 CFAP73A6NFT4 308 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TMEM110-MUSTN1A8MSY1 372 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 HIP1O00291 1037 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SLC26A4O43511 780 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 GALK1P51570 392 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 PURAQ00577 322 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 CYP4A11Q02928 519 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TBX2Q13207 712 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 HERC6Q8IVU3 1022 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 ANKK1Q8NFD2 765 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 DNAJC1Q96KC8 554 aaKnown RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 SNX27Q96L92 541 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 PANX2Q96RD6 677 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 LRRC1Q9BTT6 524 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLK1-207ENST00000461981 SEL1LQ9UBV2 794 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TFR2Q9UP52 801 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 SAR1BQ9Y6B6 198 aa6.3□□□□□ -1.4
CLK1-207ENST00000461981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.3□□□□□ -1.4
CLK1-207ENST00000461981 NLRC5Q86WI3 1866 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 GH1P01241 217 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 SELPP16109 830 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ICAM3P32942 547 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 CD97P48960 835 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 PAK2Q13177 524 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 LAMC2Q13753 1193 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 MUM1Q2TAK8 710 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 ZC2HC1CQ53FD0 456 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 ASPRV1Q53RT3 343 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 DGKHQ86XP1 1220 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 ANKRD35Q8N283 1001 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 CCDC197Q8NCU1 140 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 GIMAP8Q8ND71 665 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 LZICQ8WZA0 190 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 P3H4Q92791 437 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
CLK1-207ENST00000461981 HAUS1Q96CS2 278 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 RAD9AQ99638 391 aa6.29□□□□□ -1.4
CLK1-207ENST00000461981 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms