RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SPATA31D3P0C874 917 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 RPL17P18621 184 aaKnown RBP20.79■□□□□ 0.92
VARS-220ENST00000461874 PROZP22891 400 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 ZNF568Q3ZCX4 644 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 GLRA4Q5JXX5 417 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 FAM171A1Q5VUB5 890 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 LILRA6Q6PI73 481 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 ALKAL1Q6UXT8 129 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 SPATA31D4Q6ZUB0 917 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 CCDC149Q6ZUS6 474 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 PLCD3Q8N3E9 789 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 CEP120Q8N960 986 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 ASIC4Q96FT7 647 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 CCDC94Q9BW85 323 aaPredicted RBP20.79■□□□□ 0.92
VARS-220ENST00000461874 RHOBTB2Q9BYZ6 727 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 LIMD1Q9UGP4 676 aa20.79■□□□□ 0.92
VARS-220ENST00000461874 ZNF318Q5VUA4 2279 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 SMIM28A0A1B0GU29 152 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 CCDC195A0A1B0GUA6 201 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 PAPLNO95428 1278 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 BRD1O95696 1058 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 MYBP10242 640 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 MCF2P10911 925 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 UBA7P41226 1012 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 SMTNP53814 917 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 YARSP54577 528 aaKnown RBP20.78■□□□□ 0.92
VARS-220ENST00000461874 ELAVL2Q12926 359 aaKnown RBP20.78■□□□□ 0.92
VARS-220ENST00000461874 ARSHQ5FYA8 562 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 XKR4Q5GH76 650 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 PRSS55Q6UWB4 352 aaPredicted RBP20.78■□□□□ 0.92
VARS-220ENST00000461874 CYP26C1Q6V0L0 522 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 TMEM161BQ8NDZ6 487 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 PIK3R5Q8WYR1 880 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 TCHPQ9BT92 498 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 TOPORSQ9NS56 1045 aaPredicted RBP20.78■□□□□ 0.92
VARS-220ENST00000461874 SORCS3Q9UPU3 1222 aa20.78■□□□□ 0.92
VARS-220ENST00000461874 NPHP3-ACAD11A0A0J9YXS1 232 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 TMEM189-UBE2V1I3L0A0 370 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 RFPL2O75678 378 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 MAPTP10636 758 aaKnown RBP20.77■□□□□ 0.92
VARS-220ENST00000461874 PDCP20941 246 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 LONP1P36776 959 aaKnown RBP20.77■□□□□ 0.92
VARS-220ENST00000461874 OSTNP61366 133 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 STRN3Q13033 797 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 MTMR3Q13615 1198 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 SF3A1Q15459 793 aaKnown RBP20.77■□□□□ 0.92
VARS-220ENST00000461874 DCLRE1AQ6PJP8 1040 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 MPZL3Q6UWV2 235 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 OTOP3Q7RTS5 596 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 CEP57Q86XR8 500 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 GLYCTKQ8IVS8 523 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 UBALD2Q8IYN6 164 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 LNX1Q8TBB1 728 aaPredicted RBP20.77■□□□□ 0.92
VARS-220ENST00000461874 ACSF2Q96CM8 615 aaPredicted RBP20.77■□□□□ 0.92
VARS-220ENST00000461874 CALML4Q96GE6 196 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 UROC1Q96N76 676 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 BACH2Q9BYV9 841 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 KCNH6Q9H252 994 aa20.77■□□□□ 0.92
VARS-220ENST00000461874 VPS37CA5D8V6 355 aaPredicted RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 B3GAT3O94766 335 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 ASGR2P07307 311 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 IGFBP6P24592 240 aaPredicted RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 CLCNKBP51801 687 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 CACNB1Q02641 598 aaPredicted RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 GRIN1Q05586 938 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 UPP1Q16831 310 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 LRRC15Q8TF66 581 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 ZNF707Q96C28 371 aaPredicted RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 ZBTB45Q96K62 511 aaPredicted RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 ACAP3Q96P50 834 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 CLSTN3Q9BQT9 956 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 WDR6Q9NNW5 1121 aaKnown RBP20.76■□□□□ 0.91
VARS-220ENST00000461874 MYO10Q9HD67 2058 aa20.76■□□□□ 0.91
VARS-220ENST00000461874 TOM1L1O75674 476 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 PSMD5Q16401 504 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 PDXDC1Q6P996 788 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.75■□□□□ 0.91
VARS-220ENST00000461874 FBXL6Q8N531 539 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 SMG7Q92540 1137 aaKnown RBP20.75■□□□□ 0.91
VARS-220ENST00000461874 SNX27Q96L92 541 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 BLOC1S4Q9NUP1 217 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 ZDHHC7Q9NXF8 308 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 LARSQ9P2J5 1176 aaKnown RBP20.75■□□□□ 0.91
VARS-220ENST00000461874 ODF2LQ9ULJ1 636 aa20.75■□□□□ 0.91
VARS-220ENST00000461874 KCNE1P15382 129 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 FGFR3P22607 806 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 SOX4Q06945 474 aaPredicted RBP20.74■□□□□ 0.91
VARS-220ENST00000461874 ZPBP2Q6X784 338 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 GPBP1Q86WP2 473 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 SUGP1Q8IWZ8 645 aaKnown RBP20.74■□□□□ 0.91
VARS-220ENST00000461874 KCNN1Q92952 543 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 DDX27Q96GQ7 796 aaKnown RBP20.74■□□□□ 0.91
VARS-220ENST00000461874 ZMAT2Q96NC0 199 aaKnown RBP20.74■□□□□ 0.91
VARS-220ENST00000461874 SLC38A7Q9NVC3 462 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 CNTN3Q9P232 1028 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 FBXW11Q9UKB1 542 aa20.74■□□□□ 0.91
VARS-220ENST00000461874 PLXNA3P51805 1871 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms