RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 FKTNO75072 461 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 NPTXRO95502 500 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 HMGCRP04035 888 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 PLEKP08567 350 aaPredicted RBP4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 PNMA6AP0CW24 399 aaPredicted RBP4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 ELNP15502 786 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 NSFP46459 744 aaKnown RBP4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 TM4SF4P48230 202 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 APLP1P51693 650 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 TERF1P54274 439 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 DLG4P78352 724 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM132DQ14C87 1099 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 RPS6KA1Q15418 735 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 NYAP1Q6ZVC0 841 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 PEX26Q7Z412 305 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 WDR49Q8IV35 697 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 GLYCTKQ8IVS8 523 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 BEST2Q8NFU1 509 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 CD99L2Q8TCZ2 262 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 DNAJB3Q8WWF6 145 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 BAP1Q92560 729 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 GOLGA1Q92805 767 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 CAPZA3Q96KX2 299 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 ACO2Q99798 780 aaKnown RBP4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 PI4K2AQ9BTU6 479 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 PLVAPQ9BX97 442 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 GANQ9H2C0 597 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 CREBZFQ9NS37 354 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 AIPL1Q9NZN9 384 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 ARHGAP20Q9P2F6 1191 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 TNFSF13BQ9Y275 285 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 SAR1BQ9Y6B6 198 aa4.43□□□□□ -1.7
ATP13A3-206ENST00000461660 KBTBD13C9JR72 458 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 RNF225M0QZC1 329 aaPredicted RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 KIF3CO14782 793 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 CYP26A1O43174 497 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 SEPT4O43236 478 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 SPOPO43791 374 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 MSCO60682 206 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 RPS6KA5O75582 802 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 STBD1O95210 358 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 KIF4AO95239 1232 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 F2P00734 622 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 PIGRP01833 764 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 STAG3L1P0CL83 205 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TCP1P17987 556 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 HNRNPH3P31942 346 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TUBB4BP68371 445 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 WHAMMP3Q1A5X7 153 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 SGSM1Q2NKQ1 1148 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM63BQ5T3F8 832 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 EEF1DP3Q658K8 133 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 PPP1R2P3Q6NXS1 205 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM270Q6UE05 265 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 RPUSD2Q8IZ73 545 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 PPP1R13LQ8WUF5 828 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 ZNF653Q96CK0 615 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 ZBTB10Q96DT7 871 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TRIM11Q96F44 468 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 CPB2Q96IY4 423 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 MFSD14AQ96MC6 490 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 AGPAT1Q99943 283 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 MTMR12Q9C0I1 747 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 NIF3L1Q9GZT8 377 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 CDT1Q9H211 546 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 FBXL5Q9UKA1 691 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 Q9Y3F1 56 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 HYOU1Q9Y4L1 999 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 V9GYY5 206 aaPredicted RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 WDR90Q96KV7 1748 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 A0A087X0T9 212 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 SMIM35A0A1B0GVV1 85 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 FOXN3O00409 490 aaPredicted RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 B4GALT5O43286 388 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 ERLIN1O75477 346 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 MOCS3O95396 460 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 FAM228BP0C875 321 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 CXCL8P10145 99 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 EIF4BP23588 611 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 ADSSP30520 456 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 RBP5P82980 135 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TRAPPC11Q7Z392 1133 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM139Q8IV31 216 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 RNF10Q8N5U6 811 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 ARRDC4Q8NCT1 418 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 IPO4Q8TEX9 1081 aaKnown RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 PSMB7Q99436 277 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 C16orf70Q9BSU1 422 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 STRA6Q9BX79 667 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TTYH3Q9C0H2 523 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 HMX1Q9NP08 348 aaPredicted RBP4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 PDLIM7Q9NR12 457 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 HDAC6Q9UBN7 1215 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 SRRDQ9UH36 339 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 CDC23Q9UJX2 597 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 JRKLQ9Y4A0 524 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 TRIM17Q9Y577 477 aa4.42□□□□□ -1.7
ATP13A3-206ENST00000461660 GOLGA6L10A0A0M3HER8 536 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms