RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 GDF3Q9NR23 364 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 CTTNBP2NLQ9P2B4 639 aa21.76■■□□□ 1.07
CCM2-203ENST00000461377 NOC2LQ9Y3T9 749 aaKnown RBP21.76■■□□□ 1.07
CCM2-203ENST00000461377 CNTNAP2Q9UHC6 1331 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 MSCO60682 206 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 VNN1O95497 513 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 TXNP10599 105 aaKnown RBP21.75■■□□□ 1.07
CCM2-203ENST00000461377 SLC26A2P50443 739 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 LAMTOR4Q0VGL1 99 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 WDR44Q5JSH3 913 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 TTC7AQ9ULT0 858 aaPredicted RBP21.75■■□□□ 1.07
CCM2-203ENST00000461377 HPCAL4Q9UM19 191 aa21.75■■□□□ 1.07
CCM2-203ENST00000461377 DIS3Q9Y2L1 958 aaKnown RBP21.75■■□□□ 1.07
CCM2-203ENST00000461377 GLI1P08151 1106 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 PIK3CAP42336 1068 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 MXD4Q14582 209 aaPredicted RBP21.74■■□□□ 1.07
CCM2-203ENST00000461377 TTLL4Q14679 1199 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 PNMA8AQ86V59 439 aaPredicted RBP21.74■■□□□ 1.07
CCM2-203ENST00000461377 MRPL4Q9BYD3 311 aaKnown RBP21.74■■□□□ 1.07
CCM2-203ENST00000461377 PDGFCQ9NRA1 345 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 TTLL13PA6NNM8 815 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 POLR3GO15318 223 aaPredicted RBP21.74■■□□□ 1.07
CCM2-203ENST00000461377 HEXIM1O94992 359 aaKnown RBP21.74■■□□□ 1.07
CCM2-203ENST00000461377 KRT5P13647 590 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 TMEM63BQ5T3F8 832 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 IFT20Q8IY31 132 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 GPRC5AQ8NFJ5 357 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 SMARCAD1Q9H4L7 1026 aa21.74■■□□□ 1.07
CCM2-203ENST00000461377 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
CCM2-203ENST00000461377 GRIN3BO60391 1043 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 CYP1A2P05177 515 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 EPHB4P54760 987 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 BIRC3Q13489 604 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 ARMCX2Q7L311 632 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 BRSK2Q8IWQ3 736 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 ZBTB8OSQ8IWT0 167 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 LRRC71Q8N4P6 559 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 JPH2Q9BR39 696 aaPredicted RBP21.73■■□□□ 1.07
CCM2-203ENST00000461377 SLC45A1Q9Y2W3 748 aa21.73■■□□□ 1.07
CCM2-203ENST00000461377 CCDC188H7C350 402 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 CLDN3O15551 220 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 FAM189A1O60320 539 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 TOM1L1O75674 476 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 AARSP49588 968 aaKnown RBP eCLIP21.72■■□□□ 1.07
CCM2-203ENST00000461377 FAM193AP78312 1265 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 RNF149Q8NC42 400 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 GDAP1L1Q96MZ0 367 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 ACO2Q99798 780 aaKnown RBP21.72■■□□□ 1.07
CCM2-203ENST00000461377 C2orf40Q9H1Z8 148 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 CARD9Q9H257 536 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 ZCCHC17Q9NP64 241 aaKnown RBP21.72■■□□□ 1.07
CCM2-203ENST00000461377 GTF3C4Q9UKN8 822 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 ALG6Q9Y672 507 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 RAD51CO43502 376 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 PRKCBP05771 671 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 CCNA1P78396 465 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 CLEC16AQ2KHT3 1053 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 ZNF792Q3KQV3 632 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 DCAF12L1Q5VU92 463 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 ACAD10Q6JQN1 1059 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 EMBQ6PCB8 327 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 KLHL7Q8IXQ5 586 aa21.72■■□□□ 1.07
CCM2-203ENST00000461377 HBP1O60381 514 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 SRGAP2CP0DJJ0 459 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 HARSP12081 509 aaKnown RBP21.71■■□□□ 1.07
CCM2-203ENST00000461377 ACO1P21399 889 aaKnown RBP21.71■■□□□ 1.07
CCM2-203ENST00000461377 GRM1Q13255 1194 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 OR5B17Q8NGF7 314 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 MS4A4AQ96JQ5 239 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 APOBEC3GQ9HC16 384 aaKnown RBP21.71■■□□□ 1.07
CCM2-203ENST00000461377 EPB41L5Q9HCM4 733 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 TRPC6Q9Y210 931 aa21.71■■□□□ 1.07
CCM2-203ENST00000461377 PDHXO00330 501 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 KRIT1O00522 736 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 ABLIM1O14639 778 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 CETPP11597 493 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 GUCY2DQ02846 1103 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 ARHGAP1Q07960 439 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 DMTNQ08495 405 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 MAPK6Q16659 721 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 SEZ6Q53EL9 994 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 SPOPLQ6IQ16 392 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 SND1Q7KZF4 910 aaKnown RBP eCLIP21.7■■□□□ 1.07
CCM2-203ENST00000461377 ZNF677Q86XU0 584 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 CAVIN3Q969G5 261 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 ZNF653Q96CK0 615 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 RPS6KC1Q96S38 1066 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 AP1M1Q9BXS5 423 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 MED4Q9NPJ6 270 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 PCDHB2Q9Y5E7 798 aa21.7■■□□□ 1.07
CCM2-203ENST00000461377 ZNFX1Q9P2E3 1918 aaKnown RBP21.7■■□□□ 1.06
CCM2-203ENST00000461377 MIF4GDA9UHW6 222 aaKnown RBP21.7■■□□□ 1.06
CCM2-203ENST00000461377 ATMINO43313 823 aaPredicted RBP21.7■■□□□ 1.06
CCM2-203ENST00000461377 BPIFB4P59827 614 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 MCL1Q07820 350 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 CUL2Q13617 745 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 TAPT1Q6NXT6 567 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 UBE2Q2Q8WVN8 375 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 TRAPPC12Q8WVT3 735 aa21.7■■□□□ 1.06
CCM2-203ENST00000461377 ZNF408Q9H9D4 720 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms