RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 TRAK2O60296 914 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 CSDE1O75534 798 aaKnown RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 EOMESO95936 686 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 PRKCBP05771 671 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 MYL1P05976 194 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 FGFR4P22455 802 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 NPTX2P47972 431 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 RAB27AP51159 221 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 ASIC1P78348 528 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 TDGQ13569 410 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 GIT2Q14161 759 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 ARSHQ5FYA8 562 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 CDCA2Q69YH5 1023 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 NOTUMQ6P988 496 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 SLC24A5Q71RS6 500 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 TMC7Q7Z402 723 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 RGS18Q9NS28 235 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
HDAC4-207ENST00000461113 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 KIAA1671Q9BY89 1806 aa13.75□□□□□ -0.21
HDAC4-207ENST00000461113 PLXNA4Q9HCM2 1894 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 MYMKA6NI61 221 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 HOXA2O43364 376 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 MGEA5O60502 916 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 CLASP2O75122 1294 aaKnown RBP13.74□□□□□ -0.21
HDAC4-207ENST00000461113 LAG3P18627 525 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 AFMP43652 599 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 NDUFA8P51970 172 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 E2F4Q16254 413 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 FAM187BQ17R55 369 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 KIAA1841Q6NSI8 718 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 ZC3H14Q6PJT7 736 aaKnown RBP13.74□□□□□ -0.21
HDAC4-207ENST00000461113 BSNDQ8WZ55 320 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 PGBD4Q96DM1 585 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 BICD1Q96G01 975 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
HDAC4-207ENST00000461113 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 BAHCC1Q9P281 2608 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 CHD8Q9HCK8 2581 aa13.74□□□□□ -0.21
HDAC4-207ENST00000461113 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 K7ENM7 598 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 ACKR2O00590 384 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 N4BP3O15049 544 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 SLC16A4O15374 487 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 KINO60870 393 aaKnown RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 ZNF202O95125 648 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 SP9P0CG40 484 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MAPTP10636 758 aaKnown RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 FGFR1P11362 822 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 RFX1P22670 979 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 PBX3P40426 434 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 ZNF131P52739 623 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 UBE2HP62256 183 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 FAM160A1Q05DH4 1040 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MAPK7Q13164 816 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 COL9A2Q14055 689 aaPredicted RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 DAW1Q8N136 415 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MRPL43Q8N983 215 aaKnown RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 STAMQ92783 540 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 C7orf25Q9BPX7 421 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 FZD8Q9H461 694 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
HDAC4-207ENST00000461113 EXOC7Q9UPT5 735 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 PCDHB13Q9Y5F0 798 aa13.73□□□□□ -0.21
HDAC4-207ENST00000461113 C2orf71A6NGG8 1288 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 NARSO43776 548 aaKnown RBP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 TSPAN1O60635 241 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 SDHBP21912 280 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 CA8P35219 290 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 MATR3P43243 847 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 KRT17Q04695 432 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 ALCAMQ13740 583 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 DSC3Q14574 896 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 SMC1AQ14683 1233 aaKnown RBP13.72□□□□□ -0.21
HDAC4-207ENST00000461113 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 FEZF2Q8TBJ5 459 aa13.72□□□□□ -0.21
HDAC4-207ENST00000461113 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms