RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	ALDH2	P05091	517 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	CLEC2L	P0C7M8	214 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	ZNF888	P0CJ79	500 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	OSM	P13725	252 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	PTGS1	P23219	599 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	SDHA	P31040	664 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	CHKA	P35790	457 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	IL6ST	P40189	918 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	TM4SF4	P48230	202 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	KIF11	P52732	1056 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	ADK	P55263	362 aa	Known RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	IL13RA1	P78552	427 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	KIF23	Q02241	960 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	TOP3A	Q13472	1001 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	ZNF174	Q15697	407 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	CATSPERE	Q5SY80	951 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	RNF220	Q5VTB9	566 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	NPNT	Q6UXI9	565 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	FRMD7	Q6ZUT3	714 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	KCNK18	Q7Z418	384 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	DEFB132	Q7Z7B7	95 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	FAM124A	Q86V42	546 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	ASB15	Q8WXK1	588 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	RTF1	Q92541	710 aa	Known RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	COA7	Q96BR5	231 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	FOXRED1	Q96CU9	486 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	PGBD4	Q96DM1	585 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	C1GALT1C1	Q96EU7	318 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	MVB12A	Q96EY5	273 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	RIPOR3	Q96MK2	946 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	FAM193B	Q96PV7	902 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	CDC5L	Q99459	802 aa	Known RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	BOC	Q9BWV1	1114 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	QRSL1	Q9H0R6	528 aa	Known RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	CSRNP2	Q9H175	543 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	MEGF9	Q9H1U4	602 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	TMEM60	Q9H2L4	133 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	PRDM12	Q9H4Q4	367 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	FAM204A	Q9H8W3	233 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	INCENP	Q9NQS7	918 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	ZNF277	Q9NRM2	450 aa	Predicted RBP	3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	KCNH7	Q9NS40	1196 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	GALNT8	Q9NY28	637 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	SCIN	Q9Y6U3	715 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	JCAD	Q9P266	1359 aa		3.88	□□□□□ -1.79
FXR1-204	ENST00000461044	DYTN	A2CJ06	578 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	PRAMEF25	A6NGN4	478 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	GOLGA6L22	H0YM25	854 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	LAMTOR5	O43504	91 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	B3GALT2	O43825	422 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	ZNF500	O60304	480 aa	Predicted RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	PYGL	P06737	847 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	MAGEA10	P43363	369 aa	Predicted RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	PRIM2	P49643	509 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	IRF9	Q00978	393 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	MOGS	Q13724	837 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	ELF2	Q15723	593 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	UAP1L1	Q3KQV9	507 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	SPATS1	Q496A3	300 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	KANK2	Q63ZY3	851 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	ESRP1	Q6NXG1	681 aa	Known RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	DARS2	Q6PI48	645 aa	Known RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	USP45	Q70EL2	814 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	GPR155	Q7Z3F1	870 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	GGN	Q86UU5	652 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	CAMKK1	Q8N5S9	505 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	DNER	Q8NFT8	737 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	RIN2	Q8WYP3	895 aa	Predicted RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	MPP4	Q96JB8	637 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	WWC2-AS2	Q96NR7	200 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	SAMD11	Q96NU1	681 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	BARX1	Q9HBU1	254 aa	Predicted RBP	3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	CD248	Q9HCU0	757 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	UCKL1	Q9NWZ5	548 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	ARHGAP28	Q9P2N2	729 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	CDC23	Q9UJX2	597 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	LIMCH1	Q9UPQ0	1083 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	SLC4A7	Q9Y6M7	1214 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	NWD1	Q149M9	1564 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	AFF2	P51816	1311 aa		3.87	□□□□□ -1.79
FXR1-204	ENST00000461044	COL16A1	Q07092	1604 aa	Predicted RBP	3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	PRSS38	A1L453	326 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	PRAMEF22	A3QJZ6	481 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	PRSS47	A8MTI9	375 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044		H3BML4	177 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	FOXP2	O15409	715 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	NCK2	O43639	380 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	LPL	P06858	475 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	ADRB1	P08588	477 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	ABCB4	P21439	1286 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	TNFAIP3	P21580	790 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	ENPP1	P22413	925 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	EDNRB	P24530	442 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	HTR1B	P28222	390 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	POLD1	P28340	1107 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	FAM193A	P78312	1265 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	ADAM17	P78536	824 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	CD83	Q01151	205 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	ICAM4	Q14773	271 aa		3.86	□□□□□ -1.79
FXR1-204	ENST00000461044	NOLC1	Q14978	699 aa	Known RBP eCLIP	3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms