RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 LRRC8DQ7L1W4 858 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 EHBP1Q8NDI1 1231 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 LMO3Q8TAP4 145 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 IQCDQ96DY2 449 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 CGRRF1Q99675 332 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 CCDC94Q9BW85 323 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TMX1Q9H3N1 280 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 ASB7Q9H672 318 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 MMRN2Q9H8L6 949 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 PLCB1Q9NQ66 1216 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 TOPORSQ9NS56 1045 aaPredicted RBP11.81□□□□□ -0.52
CSDC2-202ENST00000460790 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 COQ4Q9Y3A0 265 aa11.81□□□□□ -0.52
CSDC2-202ENST00000460790 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
CSDC2-202ENST00000460790 NOL4O94818 638 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 GYPCP04921 128 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 PTMAP06454 111 aaKnown RBP11.8□□□□□ -0.52
CSDC2-202ENST00000460790 CXCL8P10145 99 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 SLC9A1P19634 815 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 MXI1P50539 228 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 GSDMDP57764 484 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 MYL7Q01449 175 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 TRIM14Q14142 442 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 GPNMBQ14956 572 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 ALKAL1Q6UXT8 129 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 PPFIBP1Q86W92 1011 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 CD302Q8IX05 232 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 SMG8Q8ND04 991 aaKnown RBP11.8□□□□□ -0.52
CSDC2-202ENST00000460790 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 TTYH3Q9C0H2 523 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 CAPN11Q9UMQ6 739 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 IPPQ9Y573 584 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 PCDHB2Q9Y5E7 798 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 PTPRJQ12913 1337 aa11.8□□□□□ -0.52
CSDC2-202ENST00000460790 A0A1W2PQJ5 194 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 MGEA5O60502 916 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 NBNO60934 754 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 ZNF623O75123 536 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 TRIM21P19474 475 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 CASP14P31944 242 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 LRRC26Q2I0M4 334 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 ZACNQ401N2 412 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 LMBRD2Q68DH5 695 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 MRPL10Q7Z7H8 261 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 OR5B17Q8NGF7 314 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 CPLX3Q8WVH0 158 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 LSM14BQ9BX40 385 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 HIPK3Q9H422 1215 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 SIX2Q9NPC8 291 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 FAM207AQ9NSI2 230 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-202ENST00000460790 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 TBX21Q9UL17 535 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 ATP11BQ9Y2G3 1177 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 HES2Q9Y543 173 aa11.79□□□□□ -0.52
CSDC2-202ENST00000460790 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 A0A0U1RQF3 1178 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 AKR1B15C9JRZ8 316 aaPredicted RBP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 EPHB6O15197 1021 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 RECQL4O94761 1208 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 VNN1O95497 513 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 TPM1P09493 284 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 CLTBP09497 229 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 SKIP12755 728 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 ACTN1P12814 892 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 AKAP5P24588 427 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 YARSP54577 528 aaKnown RBP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 TDRD10Q5VZ19 366 aaKnown RBP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 TRIM65Q6PJ69 517 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 TRAPPC11Q7Z392 1133 aa11.78□□□□□ -0.52
CSDC2-202ENST00000460790 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
CSDC2-202ENST00000460790 EFCAB13Q8IY85 973 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms