RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 KAZNQ674X7 775 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 CFAP36Q96G28 342 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 DACH2Q96NX9 599 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 DDX25Q9UHL0 483 aaKnown RBP10.33□□□□□ -0.76
UFD1-205ENST00000459854 FBXL5Q9UKA1 691 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 LAMB2P55268 1798 aa10.33□□□□□ -0.76
UFD1-205ENST00000459854 K7ENM7 598 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ADD1P35611 737 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 CAP2P40123 477 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 THOC5Q13769 683 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DHX40Q8IX18 779 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 DEPTORQ8TB45 409 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 CCDC127Q96BQ5 260 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ACCSQ96QU6 501 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 MYL10Q9BUA6 226 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SH3GLB2Q9NR46 395 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 FAM198AQ9UFP1 575 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SCAF8Q9UPN6 1271 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 SNX24Q9Y343 169 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DDTLA6NHG4 134 aaPredicted RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 TBKBP1A7MCY6 615 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 UBE2Q2LH0YL09 131 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ATP1A3P13637 1013 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ZCWPW2Q504Y3 356 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DARS2Q6PI48 645 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 RPS6KC1Q96S38 1066 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 GTPBP10A4D1E9 387 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 E2F6O75461 281 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 MYBL1P10243 752 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 AKR1B1P15121 316 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 LIFRP42702 1097 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 LIG4P49917 911 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 TFDP2Q14188 446 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 HACE1Q8IYU2 909 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ZNF555Q8NEP9 628 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 CNPY3Q9BT09 278 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SNX25Q9H3E2 840 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DCLRE1BQ9H816 532 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 OLFML3Q9NRN5 406 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SRRM3A6NNA2 597 aaPredicted RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 HNRNPCL2B2RXH8 293 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 PRPF3O43395 683 aaKnown RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 TBC1D12O60347 775 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 CETPP11597 493 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 PTPREP23469 700 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 CASP2P42575 452 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 BBS9Q3SYG4 887 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 DNAJC24Q6P3W2 148 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 ZBTB8OSQ8IWT0 167 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 LPAR1Q92633 364 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SMYD3Q9H7B4 428 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SLC5A4Q9NY91 659 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 GCNT4Q9P109 453 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 NYAP2Q9P242 653 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
UFD1-205ENST00000459854 ADGRA3Q8IWK6 1321 aa10.32□□□□□ -0.76
UFD1-205ENST00000459854 PVALEFA0A1B0GWK0 134 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 CFAP69A5D8W1 941 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 ZNF233A6NK53 670 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 GOLGA8TH3BQL2 631 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 ABCE1P61221 599 aaKnown RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 GRIN1Q05586 938 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 IFRD2Q12894 506 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 WLSQ5T9L3 541 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 DDX42Q86XP3 938 aaKnown RBP eCLIP10.31□□□□□ -0.76
UFD1-205ENST00000459854 STX19Q8N4C7 294 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 ZBTB10Q96DT7 871 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 H3BRJ5 948 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 LPXNO60711 386 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 GNAT1P11488 350 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 NQO1P15559 274 aaKnown RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 PAMP19021 973 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 GTF2A2P52657 109 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 GPC5P78333 572 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 CYP27A1Q02318 531 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 LRRC31Q6UY01 552 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 FRA10AC1Q70Z53 315 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 PRUNE1Q86TP1 453 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 PLD3Q8IV08 490 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TRIM59Q8IWR1 403 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 HOXC10Q9NYD6 342 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 USP27XA6NNY8 438 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 EFCAB14O75071 495 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.31□□□□□ -0.76
UFD1-205ENST00000459854 SURF1Q15526 300 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
UFD1-205ENST00000459854 NAIF1Q69YI7 327 aaPredicted RBP10.31□□□□□ -0.76
UFD1-205ENST00000459854 SCYL2Q6P3W7 929 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms