RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MBTPS1Q14703 1052 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 SNRNP35Q16560 246 aaKnown RBP11.21□□□□□ -0.62
USP39-210ENST00000459775 TRIM60Q495X7 471 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 HSP90B2PQ58FF3 399 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 TCERG1LQ5VWI1 586 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 SLC39A5Q6ZMH5 540 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 ZNF410Q86VK4 478 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 FAM228AQ86W67 206 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 FAM126BQ8IXS8 530 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 XXYLT1Q8NBI6 393 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 RSPH1Q8WYR4 309 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 CEP63Q96MT8 703 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 NOC4LQ9BVI4 516 aaKnown RBP11.21□□□□□ -0.62
USP39-210ENST00000459775 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.62
USP39-210ENST00000459775 NFKBIZQ9BYH8 718 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 PDZD7Q9H5P4 517 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 PTPRHQ9HD43 1115 aa11.21□□□□□ -0.62
USP39-210ENST00000459775 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.62
USP39-210ENST00000459775 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.62
USP39-210ENST00000459775 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 FAM189A1O60320 539 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 ERLIN2O94905 339 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PIGRP01833 764 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 CKBP12277 381 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 RPL13P26373 211 aaKnown RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 TLE2Q04725 743 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 SPAG1Q07617 926 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 MGAT3Q09327 533 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 NR1I3Q14994 352 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 ZNF568Q3ZCX4 644 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 C1orf220Q5T0J3 134 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 TRAF7Q6Q0C0 670 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 Q7L0L9 218 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 TRIM59Q8IWR1 403 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 CDT1Q9H211 546 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PRMT7Q9NVM4 692 aaPredicted RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 ARMCX3Q9UH62 379 aaPredicted RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 LRRC10BA6NIK2 292 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 TOM1L1O75674 476 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 EPB41P11171 864 aaKnown RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 COL6A1P12109 1028 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PROZP22891 400 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 EEF1GP26641 437 aaKnown RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 CD52P31358 61 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PSMC2P35998 433 aaKnown RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 UBXN1Q04323 297 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 POU5F1BQ06416 359 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PTK7Q13308 1070 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 SRGAP1Q7Z6B7 1085 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PCGF5Q86SE9 256 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 SLC9A9Q8IVB4 645 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 GOLGA5Q8TBA6 731 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 NCAPGQ9BPX3 1015 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 ST3GAL5Q9UNP4 418 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
USP39-210ENST00000459775 ATP11BQ9Y2G3 1177 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 TRPV2Q9Y5S1 764 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
USP39-210ENST00000459775 CD4P01730 458 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
USP39-210ENST00000459775 LPIN1Q14693 890 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 NFIL3Q16649 462 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 LRRC26Q2I0M4 334 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 FOXR2Q6PJQ5 311 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 MPZL3Q6UWV2 235 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 C12orf56Q8IXR9 622 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 GPD1LQ8N335 351 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 SLC35C1Q96A29 364 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 NDST4Q9H3R1 872 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 PDE11AQ9HCR9 933 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP39-210ENST00000459775 PTPRJQ12913 1337 aa11.19□□□□□ -0.62
USP39-210ENST00000459775 A0A1B0GUA9 196 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 RNF225M0QZC1 329 aaPredicted RBP11.18□□□□□ -0.62
USP39-210ENST00000459775 MGEA5O60502 916 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 RPS6KA5O75582 802 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 NPTXRO95502 500 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FGFR1OPO95684 399 aaKnown RBP11.18□□□□□ -0.62
USP39-210ENST00000459775 GARTP22102 1010 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CASQ1P31415 396 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CCL23P55773 120 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 PPP3CAQ08209 521 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FAAP100Q0VG06 881 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 GPNMBQ14956 572 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 FAM187BQ17R55 369 aa11.18□□□□□ -0.62
USP39-210ENST00000459775 CBWD6Q4V339 395 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms