RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CLDND1Q9NY35 253 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 SERTAD1Q9UHV2 236 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 HPSEQ9Y251 543 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 IRAK3Q9Y616 596 aa17.63■□□□□ 0.41
CD28-203ENST00000458610 A0A0B4J269 797 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 B4GALT3O60512 393 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 PPP1R37O75864 691 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 AFMP43652 599 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 POU5F1Q01860 360 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 ELAVL2Q12926 359 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 COASYQ13057 564 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 ADAM15Q13444 863 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 COL19A1Q14993 1142 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 KIAA1841Q6NSI8 718 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 DCLRE1AQ6PJP8 1040 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 RBM23Q86U06 439 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 GPR65Q8IYL9 337 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 CEP120Q8N960 986 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 FSIP1Q8NA03 581 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 SNX27Q96L92 541 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 EMILIN2Q9BXX0 1053 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 ZBP1Q9H171 429 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 RPF1Q9H9Y2 349 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 MRPL17Q9NRX2 175 aaKnown RBP17.62■□□□□ 0.41
CD28-203ENST00000458610 ADAM28Q9UKQ2 775 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 FAM50BQ9Y247 325 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 STYXL1Q9Y6J8 313 aa17.62■□□□□ 0.41
CD28-203ENST00000458610 C2orf71A6NGG8 1288 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
CD28-203ENST00000458610 LDHAP00338 332 aaKnown RBP17.61■□□□□ 0.41
CD28-203ENST00000458610 SOD2P04179 222 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 URODP06132 367 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 KCNA5P22460 613 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 PPP2R3AQ06190 1150 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 DUSP6Q16828 381 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 KANK3Q6NY19 840 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 POMGNT1Q8WZA1 660 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 CNTN3Q9P232 1028 aa17.61■□□□□ 0.41
CD28-203ENST00000458610 CASTOR2A6NHX0 329 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 KIAA0391O15091 583 aaKnown RBP17.6■□□□□ 0.41
CD28-203ENST00000458610 EIF3DO15371 548 aaKnown RBP eCLIP17.6■□□□□ 0.41
CD28-203ENST00000458610 TRAPPC3O43617 180 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 ACTN4O43707 911 aaKnown RBP17.6■□□□□ 0.41
CD28-203ENST00000458610 RPL9P32969 192 aaKnown RBP17.6■□□□□ 0.41
CD28-203ENST00000458610 PSMD2Q13200 908 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 CTC1Q2NKJ3 1217 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 LEXMQ3ZCV2 418 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 GLRA4Q5JXX5 417 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 FAM26FQ5R3K3 315 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 ADGRD2Q7Z7M1 963 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 BCL7CQ8WUZ0 217 aaPredicted RBP17.6■□□□□ 0.41
CD28-203ENST00000458610 BLZF1Q9H2G9 400 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 MARCH5Q9NX47 278 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 AGO2Q9UKV8 859 aaKnown RBP17.6■□□□□ 0.41
CD28-203ENST00000458610 SF3B1O75533 1304 aaKnown RBP eCLIP17.6■□□□□ 0.41
CD28-203ENST00000458610 KIAA1671Q9BY89 1806 aa17.6■□□□□ 0.41
CD28-203ENST00000458610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
CD28-203ENST00000458610 HIDE1A8MVS5 230 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 ANKRD63C9JTQ0 380 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 PER2O15055 1255 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 MYBP10242 640 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 GARTP22102 1010 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 GLUD2P49448 558 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 NDUFV1P49821 464 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 NDUFA8P51970 172 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
CD28-203ENST00000458610 CREMQ03060 361 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 NAB2Q15742 525 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 FUT10Q6P4F1 479 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 HAPLN2Q9GZV7 340 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.59■□□□□ 0.41
CD28-203ENST00000458610 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
CD28-203ENST00000458610 PCDHGC5Q9Y5F6 944 aa17.59■□□□□ 0.41
CD28-203ENST00000458610 UBE4BO95155 1302 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.58■□□□□ 0.4
CD28-203ENST00000458610 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 TMEM189-UBE2V1I3L0A0 370 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 B3GAT3O94766 335 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 PRPF6O94906 941 aaKnown RBP17.58■□□□□ 0.4
CD28-203ENST00000458610 ZNF202O95125 648 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 CYP3A5P20815 502 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 TFF2Q03403 129 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 CUL4BQ13620 913 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 SEZ6Q53EL9 994 aa17.58■□□□□ 0.4
CD28-203ENST00000458610 SLC39A4Q6P5W5 647 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms