RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 HS1BP3Q53T59 392 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 FKBP15Q5T1M5 1219 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 KLHDC7AQ5VTJ3 777 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 TDRD10Q5VZ19 366 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 SPOPLQ6IQ16 392 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 TRIM65Q6PJ69 517 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 SESTD1Q86VW0 696 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 DNAAF5Q86Y56 855 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 BRSK2Q8IWQ3 736 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CCDC150Q8NCX0 1101 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ANKRD20A12PQ8NF67 263 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 KREMEN1Q96MU8 473 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 DEFB118Q96PH6 123 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 MAP7D2Q96T17 732 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 DNAJC7Q99615 494 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 JPH2Q9BR39 696 aaPredicted RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 KATNAL1Q9BW62 490 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 NAA15Q9BXJ9 866 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 C2orf40Q9H1Z8 148 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 APOBEC3GQ9HC16 384 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 METTL14Q9HCE5 456 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 GCNT4Q9P109 453 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CGNQ9P2M7 1197 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 FRMD4BQ9Y2L6 1034 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CENPFP49454 3210 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 CITO14578 2027 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 FANCGO15287 622 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 OGTO15294 1046 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 KPNA6O60684 536 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 NPTXRO95502 500 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 C4BPAP04003 597 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 SFPQP23246 707 aaKnown RBP eCLIP9.48□□□□□ -0.89
RIF1-208ENST00000457745 LBX1P52954 281 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 PRMT2P55345 433 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 JAM2P57087 298 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 GSDMDP57764 484 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 CLDN10P78369 228 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 MRPS6P82932 125 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 SLC10A6Q3KNW5 377 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 FIGNQ5HY92 759 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 HGSNATQ68CP4 663 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 INTS8Q75QN2 995 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 SV2AQ7L0J3 742 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 SRGAP1Q7Z6B7 1085 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 ZNF410Q86VK4 478 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 ACRBPQ8NEB7 543 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 TATDN2Q93075 761 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 PCMTD1Q96MG8 357 aaPredicted RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 CGRRF1Q99675 332 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 ARID3AQ99856 593 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 CELF4Q9BZC1 486 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 SENP6Q9GZR1 1112 aaPredicted RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 NXF3Q9H4D5 531 aaKnown RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 PRMT7Q9NVM4 692 aaPredicted RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 RBAKQ9NYW8 714 aaPredicted RBP9.48□□□□□ -0.89
RIF1-208ENST00000457745 ARHGAP20Q9P2F6 1191 aa9.48□□□□□ -0.89
RIF1-208ENST00000457745 TET1Q8NFU7 2136 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 A0A1B0GUA9 196 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 ZNF233A6NK53 670 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 LACTBL1A8MY62 500 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 PPEF2O14830 753 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 CLDN3O15551 220 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 ZEB2O60315 1214 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 KRT13P13646 458 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 UCHL3P15374 230 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 TMOD1P28289 359 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 MATR3P43243 847 aaKnown RBP eCLIP9.47□□□□□ -0.89
RIF1-208ENST00000457745 MXI1P50539 228 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
RIF1-208ENST00000457745 MEA1Q16626 185 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 PTGISQ16647 500 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 EXOC3L4Q17RC7 722 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 RRAGAQ7L523 313 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 CATSPER4Q7RTX7 472 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 EXOC8Q8IYI6 725 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 SMG8Q8ND04 991 aaKnown RBP9.47□□□□□ -0.89
RIF1-208ENST00000457745 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 LINC01599Q8WXQ3 324 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 TRIM44Q96DX7 344 aaPredicted RBP9.47□□□□□ -0.89
RIF1-208ENST00000457745 ZMAT2Q96NC0 199 aaKnown RBP9.47□□□□□ -0.89
RIF1-208ENST00000457745 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 PLCB1Q9NQ66 1216 aa9.47□□□□□ -0.89
RIF1-208ENST00000457745 CACNG4Q9UBN1 327 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms