RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LDHAP00338 332 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 C4BPAP04003 597 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 COMTP21964 271 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 PEX5P50542 639 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 WNT7BP56706 349 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 NCAPG2Q86XI2 1143 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 DDX42Q86XP3 938 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 ZNF677Q86XU0 584 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 DEPTORQ8TB45 409 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 ZNF653Q96CK0 615 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 LRRC45Q96CN5 670 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 NUP85Q9BW27 656 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 SPATC1LQ9H0A9 340 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 TMEM134Q9H6X4 195 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 TRPC6Q9Y210 931 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 UTP11Q9Y3A2 253 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 K7ERI5 159 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 GGPS1O95749 300 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 TGFB3P10600 412 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 KRT5P13647 590 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 NEDD9Q14511 834 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 KCTD19Q17RG1 926 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-202ENST00000457422 CLEC16AQ2KHT3 1053 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 CRELD2Q6UXH1 353 aaPredicted RBP17.9■□□□□ 0.46
CCDC43-202ENST00000457422 LRIG3Q6UXM1 1119 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 KRT35Q92764 455 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 ARL8AQ96BM9 186 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 FNBP1Q96RU3 617 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 HAPLN2Q9GZV7 340 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 RAB17Q9H0T7 212 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 NEUROG2Q9H2A3 272 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 PPME1Q9Y570 386 aa17.9■□□□□ 0.46
CCDC43-202ENST00000457422 CALCAP01258 141 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 CTNNA2P26232 953 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 CTNNA1P35221 906 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 MARCKSL1P49006 195 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ACOT2P49753 483 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 DHX34Q14147 1143 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 MESDQ14696 234 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 TDRD10Q5VZ19 366 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ADAT2Q7Z6V5 191 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ELP3Q9H9T3 547 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ERVK-5Q9HDB9 667 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ADARB2Q9NS39 739 aaKnown RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 NRBP2Q9NSY0 501 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 A0A0G2JLL6 359 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 FAM187AA6NFU0 413 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 IRF6O14896 467 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 DAPK3O43293 454 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 IVLP07476 585 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 WDR44Q5JSH3 913 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 FAM160B1Q5W0V3 765 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 PRRT2Q7Z6L0 340 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ZBTB45Q96K62 511 aaPredicted RBP17.89■□□□□ 0.45
CCDC43-202ENST00000457422 PAGR1Q9BTK6 254 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 PTPRJQ12913 1337 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
CCDC43-202ENST00000457422 A0A0B4J269 797 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 KRT14P02533 472 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 EDN1P05305 212 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-202ENST00000457422 TNNI1P19237 187 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 IRX3P78415 501 aaPredicted RBP17.88■□□□□ 0.45
CCDC43-202ENST00000457422 DR1Q01658 176 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 AADACL2Q6P093 401 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 SULF1Q8IWU6 871 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 DCPSQ96C86 337 aaKnown RBP17.88■□□□□ 0.45
CCDC43-202ENST00000457422 BTBD6Q96KE9 485 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 R3HDMLQ9H3Y0 253 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 CWC15Q9P013 229 aaKnown RBP17.88■□□□□ 0.45
CCDC43-202ENST00000457422 PCDHB2Q9Y5E7 798 aa17.88■□□□□ 0.45
CCDC43-202ENST00000457422 PHF2O75151 1096 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 CNMDO75829 334 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 COPB2P35606 906 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 HSD17B3P37058 310 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 PIK3CAP42336 1068 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 STAT5BP51692 787 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 BPIFB4P59827 614 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 SKOR1P84550 965 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 ZBTB41Q5SVQ8 909 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 SEL1L2Q5TEA6 688 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 METTL7BQ6UX53 244 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 LRRC31Q6UY01 552 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 CPNE8Q86YQ8 564 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 EFCAB13Q8IY85 973 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 ATP8B4Q8TF62 1192 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 OTUD5Q96G74 571 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 CGRRF1Q99675 332 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 TARS2Q9BW92 718 aaKnown RBP17.87■□□□□ 0.45
CCDC43-202ENST00000457422 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-202ENST00000457422 RBAKQ9NYW8 714 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-202ENST00000457422 ANKFY1Q9P2R3 1169 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 ADCY3O60266 1144 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 MAFO75444 373 aaPredicted RBP17.87■□□□□ 0.45
CCDC43-202ENST00000457422 VNN1O95497 513 aa17.87■□□□□ 0.45
CCDC43-202ENST00000457422 CHRNA3P32297 505 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms