RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TBC1D12O60347 775 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 ZNF131P52739 623 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 JAM2P57087 298 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 GJC2Q5T442 439 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-213ENST00000454468 LRRC57Q8N9N7 239 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 SLC26A4O43511 780 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 PPFIA4O75335 1185 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 GNA15P30679 374 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 GRM1Q13255 1194 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 XKR3Q5GH77 459 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 TMEM8AQ9HCN3 771 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 FAM114A2Q9NRY5 505 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 ZNF148Q9UQR1 794 aa12.81□□□□□ -0.36
SMPD4-213ENST00000454468 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 DSG3P32926 999 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 CUL1Q13616 776 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 LRRC14Q15048 493 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 TREML2Q5T2D2 321 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 FKBP1CQ5VVH2 108 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 CYP39A1Q9NYL5 469 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 TAF1LQ8IZX4 1826 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 CYP24A1Q07973 514 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 KCTD2Q14681 263 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ARFGAP2Q8N6H7 521 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 APOL6Q9BWW8 343 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ANKEF1Q9NU02 776 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 DBR1Q9UK59 544 aaKnown RBP12.8□□□□□ -0.36
SMPD4-213ENST00000454468 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 GOLGA8MH3BSY2 632 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ECEL1O95672 775 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 NEFHP12036 1026 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 TCF7P36402 384 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-213ENST00000454468 GTF2BQ00403 316 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 DRP2Q13474 957 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 COPS5Q92905 334 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 GDF3Q9NR23 364 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 DMAC2Q9NW81 257 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
SMPD4-213ENST00000454468 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 SLC29A2Q14542 456 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 PRPF31Q8WWY3 499 aaKnown RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 THOC1Q96FV9 657 aaKnown RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 PWWP2AQ96N64 755 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 AKT3Q9Y243 479 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 SP2Q02086 613 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 UAP1Q16222 522 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 B4GALNT4Q76KP1 1039 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 BORCS6Q96GS4 357 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 UBXN6Q9BZV1 441 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 FEZ2Q9UHY8 353 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 KRT10P13645 584 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 ZKSCAN8Q15776 578 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-213ENST00000454468 CABS1Q96KC9 395 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 ZSWIM1Q9BR11 485 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 ERP44Q9BS26 406 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 PCSK1NQ9UHG2 260 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 GGT7Q9UJ14 662 aa12.79□□□□□ -0.36
SMPD4-213ENST00000454468 LRRD1A4D1F6 860 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 TNFSF9P41273 254 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 CLCN3P51790 818 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 PMS2P54278 862 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 FMO1Q01740 532 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 NCOA4Q13772 614 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 ATP13A4Q4VNC1 1196 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 ZBTB8OSQ8IWT0 167 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 OR5B17Q8NGF7 314 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 ATP8B4Q8TF62 1192 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 SPATA33Q96N06 139 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 FAM169AQ9Y6X4 670 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 PASKQ96RG2 1323 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 OATP04181 439 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 PSMC4P43686 418 aa12.78□□□□□ -0.36
SMPD4-213ENST00000454468 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMPD4-213ENST00000454468 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms