RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 FOXQ1Q9C009 403 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 CCDC113Q9H0I3 377 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 TUFT1Q9NNX1 390 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 SLC2A4RGQ9NR83 387 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 VWA8A3KMH1 1905 aa18.7■□□□□ 0.58
CR559946.1-201ENST00000453835 N4BP3O15049 544 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 PRKCBP05771 671 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 THP07101 528 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 C8AP07357 584 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 GPC5P78333 572 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 PRPF4BQ13523 1007 aaKnown RBP18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 DCLRE1AQ6PJP8 1040 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 PADI6Q6TGC4 694 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 NACC1Q96RE7 527 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 GDAQ9Y2T3 454 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 SIT1Q9Y3P8 196 aa18.69■□□□□ 0.58
CR559946.1-201ENST00000453835 TMEM132AQ24JP5 1023 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 PPM1LQ5SGD2 360 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 LIN9Q5TKA1 542 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 RSPO2Q6UXX9 243 aaPredicted RBP18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 ITFG1Q8TB96 612 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 KCNG4Q8TDN1 519 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 FGF13Q92913 245 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 C2orf40Q9H1Z8 148 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 HCFC1R1Q9NWW0 138 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 CDH7Q9ULB5 785 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 POLIQ9UNA4 740 aa18.68■□□□□ 0.58
CR559946.1-201ENST00000453835 MYH15Q9Y2K3 1946 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 ACKR2O00590 384 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 HNRNPA1P09651 372 aaKnown RBP eCLIP18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 CYP11B2P19099 503 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 ID4P47928 161 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 TRIM29Q14134 588 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 ZNF174Q15697 407 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 ECM1Q16610 540 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 MAPK6Q16659 721 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 GLRA4Q5JXX5 417 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 CD300LGQ6UXG3 332 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 SLC7A14Q8TBB6 771 aa18.67■□□□□ 0.58
CR559946.1-201ENST00000453835 CACNA1IQ9P0X4 2223 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 NOTCH4Q99466 2003 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 LMNAP02545 664 aaKnown RBP18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 SP9P0CG40 484 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 RPA1P27694 616 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 OR1D2P34982 312 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 NAMPTP43490 491 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 STARD6P59095 220 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 FOXK2Q01167 660 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 SNW1Q13573 536 aaKnown RBP18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 AXDND1Q5T1B0 1012 aaPredicted RBP18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 NT5DC1Q5TFE4 455 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 C1orf210Q8IVY1 113 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 PJA1Q8NG27 643 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 DEPTORQ8TB45 409 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 GOLGA2P5Q9HBQ8 144 aa18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 ZFP37Q9Y6Q3 630 aaPredicted RBP18.66■□□□□ 0.58
CR559946.1-201ENST00000453835 CACNA1AO00555 2505 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 ARHGEF35A5YM69 484 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 FGFR3P22607 806 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 HOXA9P31269 272 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 CLCNKBP51801 687 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 NEK4P51957 841 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 RAB33AQ14088 237 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 POTEHQ6S545 545 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 MAML2Q8IZL2 1156 aaPredicted RBP18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 PPP1R10Q96QC0 940 aaKnown RBP18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 ADPGKQ9BRR6 497 aa18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 MTF2Q9Y483 593 aaPredicted RBP18.65■□□□□ 0.58
CR559946.1-201ENST00000453835 I3L4J1 428 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 B3GAT3O94766 335 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 OR52Z1P0C646 297 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 C3orf58Q8NDZ4 430 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 ING5Q8WYH8 240 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 KXD1Q9BQD3 176 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 CDY1Q9Y6F8 540 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 TRIP11Q15643 1979 aa18.64■□□□□ 0.57
CR559946.1-201ENST00000453835 OTOGLQ3ZCN5 2332 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 TMEM189-UBE2V1I3L0A0 370 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 XYLBO75191 536 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 BRCC3P46736 316 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 DCAF4L1Q3SXM0 396 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 ATF7IP2Q5U623 682 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 PDXDC1Q6P996 788 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 NPAS3Q8IXF0 933 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 CEP120Q8N960 986 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 DDX27Q96GQ7 796 aaKnown RBP18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 SEMA4AQ9H3S1 761 aa18.63■□□□□ 0.57
CR559946.1-201ENST00000453835 GPR179Q6PRD1 2367 aa18.62■□□□□ 0.57
CR559946.1-201ENST00000453835 KANSL1LA0AUZ9 987 aa18.62■□□□□ 0.57
CR559946.1-201ENST00000453835 CD72P21854 359 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms