RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ZDHHC7Q9NXF8 308 aa29.85■■■□□ 2.37
USP42-204ENST00000451154 IGSF9Q9P2J2 1179 aa29.85■■■□□ 2.37
USP42-204ENST00000451154 GALR2O43603 387 aaPredicted RBP29.84■■■□□ 2.37
USP42-204ENST00000451154 PAPLNO95428 1278 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 NUBP1P53384 320 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 PEX3P56589 373 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 GLRA4Q5JXX5 417 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 KRT79Q5XKE5 535 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 FLCNQ8NFG4 579 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 DUSP12Q9UNI6 340 aa29.84■■■□□ 2.37
USP42-204ENST00000451154 NARSO43776 548 aaKnown RBP29.83■■■□□ 2.37
USP42-204ENST00000451154 ZMYND10O75800 440 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 NPTX2P47972 431 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 PSMD5Q16401 504 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 MCTP1Q6DN14 999 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 DTHD1Q6ZMT9 781 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 PIK3R5Q8WYR1 880 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 EPS15L1Q9UBC2 864 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 FBXL21Q9UKT6 434 aa29.83■■■□□ 2.37
USP42-204ENST00000451154 ADAM12O43184 909 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 HIP1RO75146 1068 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 KCNK18Q7Z418 384 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 DAW1Q8N136 415 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 MMTAG2Q9BU76 263 aaKnown RBP29.82■■■□□ 2.36
USP42-204ENST00000451154 RUSC1Q9BVN2 902 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 IRF2BPLQ9H1B7 796 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.82■■■□□ 2.36
USP42-204ENST00000451154 TNFSF13BQ9Y275 285 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 VWA8A3KMH1 1905 aa29.82■■■□□ 2.36
USP42-204ENST00000451154 LAD1O00515 517 aa29.81■■■□□ 2.36
USP42-204ENST00000451154 CLCN5P51795 746 aa29.81■■■□□ 2.36
USP42-204ENST00000451154 ELAVL2Q12926 359 aaKnown RBP29.81■■■□□ 2.36
USP42-204ENST00000451154 RINT1Q6NUQ1 792 aa29.81■■■□□ 2.36
USP42-204ENST00000451154 PPP1R10Q96QC0 940 aaKnown RBP29.81■■■□□ 2.36
USP42-204ENST00000451154 ACO2Q99798 780 aaKnown RBP29.81■■■□□ 2.36
USP42-204ENST00000451154 FBXW11Q9UKB1 542 aa29.81■■■□□ 2.36
USP42-204ENST00000451154 B3GAT3O94766 335 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 NPR3P17342 541 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 PRPHP41219 470 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 CLCNKBP51801 687 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 ZRSR1Q15695 479 aaKnown RBP29.8■■■□□ 2.36
USP42-204ENST00000451154 C1orf186Q6ZWK4 172 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 APBB1IPQ7Z5R6 666 aaPredicted RBP29.8■■■□□ 2.36
USP42-204ENST00000451154 SLC44A3Q8N4M1 653 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 CEP120Q8N960 986 aa29.8■■■□□ 2.36
USP42-204ENST00000451154 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.8■■■□□ 2.36
USP42-204ENST00000451154 SFI1A8K8P3 1242 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 PI15O43692 258 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 OSTNP61366 133 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 RABEP1Q15276 862 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 CWF19L1Q69YN2 538 aaKnown RBP29.79■■■□□ 2.36
USP42-204ENST00000451154 DCLRE1AQ6PJP8 1040 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 CD300LGQ6UXG3 332 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 GET4Q7L5D6 327 aaPredicted RBP29.79■■■□□ 2.36
USP42-204ENST00000451154 TAS1R3Q7RTX0 852 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 SIX5Q8N196 739 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 ST13P5Q8NFI4 369 aaPredicted RBP29.79■■■□□ 2.36
USP42-204ENST00000451154 TARS2Q9BW92 718 aaKnown RBP29.79■■■□□ 2.36
USP42-204ENST00000451154 TMEM134Q9H6X4 195 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 GOLGA2P5Q9HBQ8 144 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 PTPRHQ9HD43 1115 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 KMT5AQ9NQR1 393 aa29.79■■■□□ 2.36
USP42-204ENST00000451154 SMIM28A0A1B0GU29 152 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 CFHP08603 1231 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 LAMP2P13473 410 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 MAPK7Q13164 816 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 DMP1Q13316 513 aaPredicted RBP29.78■■■□□ 2.36
USP42-204ENST00000451154 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.78■■■□□ 2.36
USP42-204ENST00000451154 GRASPQ7Z6J2 395 aaPredicted RBP29.78■■■□□ 2.36
USP42-204ENST00000451154 CDT1Q9H211 546 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 VPS13AQ96RL7 3174 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 MYO15AQ9UKN7 3530 aa29.78■■■□□ 2.36
USP42-204ENST00000451154 PHLPP2Q6ZVD8 1323 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 FGFR3P22607 806 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 OR1D2P34982 312 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 GRM5P41594 1212 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 NTHL1P78549 312 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 UPP1Q16831 310 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 PPM1LQ5SGD2 360 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 LIN9Q5TKA1 542 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 PDXDC1Q6P996 788 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 ALKAL1Q6UXT8 129 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 DRC1Q96MC2 740 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 PLIN2Q99541 437 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 CCDC94Q9BW85 323 aaPredicted RBP29.77■■■□□ 2.36
USP42-204ENST00000451154 MRPL4Q9BYD3 311 aaKnown RBP29.77■■■□□ 2.36
USP42-204ENST00000451154 ARHGAP28Q9P2N2 729 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 DAXXQ9UER7 740 aaPredicted RBP29.77■■■□□ 2.36
USP42-204ENST00000451154 KIF3AQ9Y496 699 aa29.77■■■□□ 2.36
USP42-204ENST00000451154 TMEM189-UBE2V1I3L0A0 370 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 SLC16A4O15374 487 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 ST18O60284 1047 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 CENPBP07199 599 aaPredicted RBP29.76■■■□□ 2.35
USP42-204ENST00000451154 FSHRP23945 695 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 YARSP54577 528 aaKnown RBP29.76■■■□□ 2.35
USP42-204ENST00000451154 RAD51AP2Q09MP3 1159 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 ZNF568Q3ZCX4 644 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 NXPE3Q969Y0 559 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 TMX3Q96JJ7 454 aa29.76■■■□□ 2.35
USP42-204ENST00000451154 TCHPQ9BT92 498 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms